Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Regulatory protein AtoC from Acinetobacter radioresistens SK82

 Score =  271 bits (694), Expect = 3e-77
 Identities = 175/474 (36%), Positives = 265/474 (55%), Gaps = 42/474 (8%)

Query: 1   MESQRIALIEDDDIVRQATGQWLQLAGFDVAM-FADGAS-ALAAIEQQSFAAVVSDVRLP 58
           M +Q+  ++  DD     T   + LA  ++    A G   A    +Q ++ A ++D+ LP
Sbjct: 1   MTNQQALILLVDDEEDLCTLMQMSLAKINIRTHIAHGLEQAKKLFQQHAYDACLTDLNLP 60

Query: 59  DTDGLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQA 118
           D +GL L+  +  +    P+ ++T +G++++A+ AL  GAFDF+ KP     L   V   
Sbjct: 61  DGNGLELVQYVSQLYPCTPIAVLTAYGNMEIAISALKAGAFDFVSKPVNQAHLQQLV--- 117

Query: 119 VSQYQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCG 178
               Q AL++   A  L       ++LIG    IQ L+  + K+A     V I GE+G G
Sbjct: 118 ----QKALNTPQSAQQLVQDALENRMLIGTSLPIQQLKIALKKIARSQAPVFITGESGTG 173

Query: 179 KELVAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADK 238
           KE+VA  +H+ S R  G F+AINCGAIP +L ESELFGH+ G+FTGA + + G +  A  
Sbjct: 174 KEVVANLVHRLSNRSDGPFIAINCGAIPSDLMESELFGHKKGSFTGASQDKQGLIYSAHG 233

Query: 239 GTLFLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELR---QHAEF 295
           G+LFLDEI  +PLAMQVK+LR +Q+  +  +GS+Q I +D RVI+A+ ++L    Q  +F
Sbjct: 234 GSLFLDEIAELPLAMQVKLLRAVQEKKIRPIGSDQEIDVDFRVISASHQDLEILVQQGKF 293

Query: 296 RQDLFYRLNVAQLYLPPLRERGDDILLLFEHFCVQVKPTW----RSLSEADRLALLTYRW 351
           RQDLF+R++V  + LPPLRER DDILLL +HF  +V   W    + L+E  +  L+   +
Sbjct: 294 RQDLFFRIHVMDIVLPPLREREDDILLLAKHFIQEVCKEWDIPNKILTERGQQFLMQQYF 353

Query: 352 PGNVRELRNV---ALRYALDDSISVGEILASCPGMTEEEASAGL----PLAIQV------ 398
           PGNVRELRN+   A+  + ++ I + + L S P    +   AG     PL  QV      
Sbjct: 354 PGNVRELRNIIERAITLSDNEYIDLPQ-LQSAPLRNVQNFVAGQINHEPLTDQVIPLSPH 412

Query: 399 ------------HNFERKVIAQALHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
                        N E++V+  AL++   N +   K+L +  R+L  +++KFGL
Sbjct: 413 RKIPAEGLEQYLENIEKEVLLTALNQTHWNRTLAAKKLGMSFRSLRYRLKKFGL 466