Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., C4-dicarboxylate transport sensor protein DctB from Xanthobacter sp. DMC5

 Score =  155 bits (391), Expect = 7e-42
 Identities = 108/340 (31%), Positives = 168/340 (49%), Gaps = 36/340 (10%)

Query: 368 VPLLLKNLTEHQELADITNVETVARRSDGSLFPVLFSLIAVSWKDRRHYLVTLIDISKRK 427
           VP     LT     A  T + T A R+  +L  V+    A  W  RR          +R 
Sbjct: 287 VPSTSWTLTVLAPTAATTRLATTAARASAALAGVVGLGSAGVWWTRRR---------RRV 337

Query: 428 KAEIALQNANRDLQQRVEERTAALKSA---------------------QQELIEASKMAA 466
           +A      A R L+ RV ERTA L +A                     Q EL++ASK+A 
Sbjct: 338 RALAREAEARRALEARVVERTAELSAANAQLVTEMEERRRARLAFDALQDELVQASKLAV 397

Query: 467 LGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLK 526
           LG++++ + HE+NQP+  +RT   ++   L+RGE     AN   + +L +R+ A+T +L+
Sbjct: 398 LGQIAAGVAHEVNQPVAAIRTFAENSRAFLDRGEPAAAAANLDTIAALTERIGAITGELR 457

Query: 527 SFAFNRPDALQAISLPDALQEILRIHQARLTPVDVRVRLSSDLP--LVMGEEQRLRQVLG 584
           +FA      ++ ++L   +   L + + RL   D+ + L  D P   V G+  RL QVL 
Sbjct: 458 AFARKSAARIEPVALAPVIDGALLLMRYRLLQTDIALALDIDRPDVAVTGDRMRLEQVLV 517

Query: 585 NLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGE 644
           NL+ NA +A+    + ++ I   +  D V+V V+DNG G+  E+L  +F PF T+K   +
Sbjct: 518 NLIQNAAEAIGTRRDGEIRIRVETRPDTVVVTVADNGPGLPEEMLGALFLPFTTTKP--Q 575

Query: 645 GLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRLRAAQ 684
           GLGLGL I  + + +  G++   N  D G  F + L  AQ
Sbjct: 576 GLGLGLVISKDIIAECGGTLKVEN--DGGAVFTVTLPRAQ 613



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 51/293 (17%), Positives = 107/293 (36%), Gaps = 26/293 (8%)

Query: 13  ILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEANTLK 72
           + L++ +   +   +  W + Q     E      ++ +R  + +   LP ++  +     
Sbjct: 29  LALMVGLDRVADYAARRWAVAQVAASAETAAALRVAVLRSEIDKQRSLPVVLAQDPEVRG 88

Query: 73  LFQGDDRPQAQ-LQQQLAQLDKAANTKGWYILTLSGSLLTAS--KNAENWKLSDG--KAI 127
             +  D  +   L Q+L  L + A T   Y++   G  + AS  +  E++  SD   +  
Sbjct: 89  ALEAPDPARLDALDQRLDALAEQARTGVIYLIDAEGHTVAASNFRTPESFLGSDYGFRPY 148

Query: 128 IHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLADQWFASDELI 187
               L           +V   P  ++A  V     ++G + ++ + + L  +W    E  
Sbjct: 149 FRIALADGRAEHFAFGTVSRKPGLYLAQRVEAQGRVLGVLVLKAEFDGLEAEWRRFAEPT 208

Query: 188 LFQNSQRHYFLSSSSVYSADWIATHPEVVAAAQKRSL-FDGTRLTLWQVEQAP------- 239
              + +    ++S   +          V   A + SL F  + LT   +  +P       
Sbjct: 209 FVTDERHIVLIASEPAFRFRTTVPLDPVERDAIRESLQFGDSPLTRLDLGPSPEEGGVLR 268

Query: 240 -----------YLAQSVTLDDLNWTLTYLTPLKNLN--ATVNWISTSAMVGVL 279
                      ++A  + +   +WTLT L P       AT    +++A+ GV+
Sbjct: 269 LRLPGRSTAQDFVAVDMPVPSTSWTLTVLAPTAATTRLATTAARASAALAGVV 321