Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., C4-dicarboxylate transport sensor protein DctB from Xanthobacter sp. DMC5

 Score =  162 bits (410), Expect = 4e-44
 Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 29/307 (9%)

Query: 401 VLFSLIAVSWKDRRHYLVTLIDISKRKKAEIALQNANRDLQQRVEERTA----------- 449
           V+  L+ + W  R+H    L    +   A+ AL  A+R+L+ +V ERTA           
Sbjct: 309 VILGLVGLYW--RQH----LRRARETLAAQAALAAAHRELEGKVAERTADLSAANTRLAA 362

Query: 450 ----------ALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERG 499
                      L++AQ EL++A+KMA LG+M++ +THELNQPLT LR L  +   LL+ G
Sbjct: 363 EIEERRRAESELRAAQDELVQAAKMATLGQMAAGVTHELNQPLTALRALADNTAKLLQHG 422

Query: 500 ETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTPV 559
             +  +AN   + +L+DR+  +T QL++FA         +     L E L I   RL   
Sbjct: 423 REEDAEANLARIAALVDRLGKITGQLRAFARRTSSEKGPVDAAAVLAESLAILAPRLRAS 482

Query: 560 DVRV--RLSSDLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRV 617
             RV   L  D   VM E  RL QVL NLV NALDA+    E  + I +  E  ++++ V
Sbjct: 483 GARVVSALDPDATQVMFEPIRLSQVLVNLVGNALDAVKGRPEAAVRIVSHREGGRIVLTV 542

Query: 618 SDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFE 677
            DNG G+       +F+PF T+K  GEGLGLGL I     RD   ++ A    + G +F+
Sbjct: 543 EDNGPGLLDGAAERIFDPFFTTKPAGEGLGLGLPISLAIARDFGATLTARTRAEGGTAFD 602

Query: 678 IRLRAAQ 684
           + + AA+
Sbjct: 603 LAMDAAE 609



 Score = 52.8 bits (125), Expect = 5e-11
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 23/217 (10%)

Query: 1   MKLNKASWIVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLD-------YISDVRRT 53
           M+ N+ + +  V+  L+A      AV E  ++ +A R GE+   D       Y   +   
Sbjct: 1   MRSNRITALGAVLSALLAAA-AVFAVLEAGEMAEA-RVGERLASDARHRAEIYAQSLEGA 58

Query: 54  LSRFYHLPYLMTNEANTLKLFQ--GDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLT 111
           + RF +LP     + N  +L     D    A++   L  L++AA     Y+L   G  + 
Sbjct: 59  IERFGYLPAAAALDENVKRLLATPSDGEQVARVNAYLETLNRAAGGTVLYLLAPGGMTIA 118

Query: 112 ASKNAENWKLSDG--------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEI 163
           AS    NW   +         +    + +    G      ++   P YF++APV +D ++
Sbjct: 119 AS----NWNTPETYVGTDFSYRPYYTEAMAGGTGRFYAVGTLTGVPGYFISAPVMVDGKV 174

Query: 164 VGAVAVQVDLNVLADQWFASDELILFQNSQRHYFLSS 200
            G VA +V+L+ L   W  + + +L  +     FL+S
Sbjct: 175 AGVVATKVNLDPLEAVWHEAADTVLVADEHGIVFLAS 211