Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 3e-28
 Identities = 87/304 (28%), Positives = 149/304 (49%), Gaps = 36/304 (11%)

Query: 402 LFSLIAVSWKDRRHYLVT---LIDISKRKKAEIALQNANRDLQQRVEERTAALKSAQQEL 458
           L SL++ + + RR        LID+S+   +E+ LQ     L+Q+VEERTA L+  ++ L
Sbjct: 121 LISLVSTALRGRRRQYEARDRLIDLSE---SELRLQRTLETLEQQVEERTAQLRHNEEAL 177

Query: 459 IEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRM 518
            ++ KM A+G+++  I H+ N  LTG+   L      + RG+   L +   L  +  +R 
Sbjct: 178 RQSQKMEAVGQLTGGIAHDFNNMLTGIIGSLELLRRRVSRGKLDDLDSLIDLGVTSANRA 237

Query: 519 AAMTSQLKSFAFNRPDALQA---------ISLPDALQEILRIHQARLTPVDVRVRLSSDL 569
           A +T +L   AF+R  +L +         +S+ + LQ  +         + + +RL+ +L
Sbjct: 238 AGLTHRL--LAFSRRQSLDSKPVEINQLVVSMGELLQRSIN------ESIKLDMRLTGEL 289

Query: 570 PLVMGEEQRLRQVLGNLVSNALDAMS-------QTLEPKL------SISAVSEEDQVIVR 616
                +  +L   L NLV NA DAM        +T    L      +   ++  D V + 
Sbjct: 290 WTAEADPNQLESALLNLVINARDAMPGGGQLLVETSNRHLDNVFTAAYGTLTPGDYVELS 349

Query: 617 VSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSF 676
           VSD GCGI   ++  +F+PF T+K +G+G GLGL+++    R  +G +   +    G + 
Sbjct: 350 VSDTGCGIPENVMGRVFDPFFTTKPIGQGTGLGLSMIYGFARQSRGHVTLHSEVGKGTTV 409

Query: 677 EIRL 680
            + L
Sbjct: 410 SLFL 413