Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., ATPase from Pseudomonas simiae WCS417

 Score =  169 bits (427), Expect = 5e-46
 Identities = 119/325 (36%), Positives = 177/325 (54%), Gaps = 30/325 (9%)

Query: 386 NVETVARRS------------DGSLFPVLFSLIAVSWKDRRHYLVTLIDISKRKKAEIA- 432
           NVE +A RS             G+   VL  L+ +  + RRHYL  +   +K ++   A 
Sbjct: 265 NVEILAPRSLISRPVRTVVAVGGATLLVLMLLLGLMMQRRRHYLERIAFEAKARRELEAR 324

Query: 433 -------LQNANRDLQQRVEERTAA---LKSAQQELIEASKMAALGRMSSAITHELNQPL 482
                  L+  NR L+Q V ER  A   L  AQ +L++A K++ALG MS++I+HELNQPL
Sbjct: 325 VVERTSDLEGLNRRLKQEVLEREHAQQELVRAQDDLVQAGKLSALGTMSASISHELNQPL 384

Query: 483 TGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLP 542
             +R+   + E+LL+   T   + N KL+  L  RMA++ + L++FA     A ++++L 
Sbjct: 385 AAIRSYAENAEILLDHERTTDARGNLKLISELTGRMASIIAHLRAFARRDRHAPESVALQ 444

Query: 543 DALQEILRIHQARLTPVDVRVRLSSDLP----LVMGEEQRLRQVLGNLVSNALDAMSQTL 598
            AL + L +   R   ++  V L  DLP     V   E RLRQVLGNL++NALDA+++  
Sbjct: 445 PALDDALALLAKRRRSME--VELVRDLPEATLWVQAGETRLRQVLGNLLANALDALTEKG 502

Query: 599 EP-KLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSL 657
            P KL +SA + +  V + + DNG G   E L    EPF T+K   +GLGLGLAI    +
Sbjct: 503 PPRKLWLSAETTDQGVNLYIRDNGPGFCMEALGRASEPFYTTKTRTQGLGLGLAICDTLM 562

Query: 658 RDMQGSIVATNNPDAGMSFEIRLRA 682
           R   G ++  N+ + G    ++LRA
Sbjct: 563 RAFGGELLFANHKEGGALLTLKLRA 587



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 71/317 (22%), Positives = 125/317 (39%), Gaps = 29/317 (9%)

Query: 9   IVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTN-- 66
           + L+ L L  + W    ++E +   +      Q L  Y++++  TL R+  LP ++ +  
Sbjct: 14  LALLALCLAPLLWPLEHLAERYYRSELAGQNRQTLDLYVANLLGTLHRYEVLPQILGDLP 73

Query: 67  EANTLKLFQGDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG-- 124
              T     G           L  +   A  +  Y++  +G  L AS    NW   D   
Sbjct: 74  ALRTALDAPGVSTNLVNANLLLKDVAAQAGVEVMYLMDTTGKTLAAS----NWDKQDSFV 129

Query: 125 ------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLAD 178
                 +    + +  R G      +  +   YF AA V     I+G + V+VDL+    
Sbjct: 130 GRNFSFRPYFSEAMAGRLGRFFGLGTTSAKRGYFFAAAVRDGDTIIGVLVVKVDLDHTES 189

Query: 179 QWFASDELILFQNSQRHYFLSSSSVYSADWIATHP------EVVAAAQKRSLFDGTRLTL 232
            W ++ E +L  +      L+S   +   + AT P        + A Q     D   L+L
Sbjct: 190 LWGSTPEQLLVTDHNGVVILTSRPQWR--FRATRPLTAEERRAIIAIQPYPTRDPQPLSL 247

Query: 233 WQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLN---ATVNWISTSAMVGVLLLLLLMRLRY 289
                  +L QS  + +  W +  L P   ++    TV  +  + ++ ++LLL LM  R 
Sbjct: 248 ---SNTAWLRQSTAIAETGWNVEILAPRSLISRPVRTVVAVGGATLLVLMLLLGLMMQRR 304

Query: 290 EQYQKRLS-EAKIQHVL 305
             Y +R++ EAK +  L
Sbjct: 305 RHYLERIAFEAKARREL 321