Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

 Score =  102 bits (254), Expect = 6e-26
 Identities = 125/454 (27%), Positives = 205/454 (45%), Gaps = 73/454 (16%)

Query: 263 LNATVNWISTSAMVGVLLLLLLMRLRYEQYQKRLSEAKIQHVLFEAEERQRNMINKTHVG 322
           L A V  IS  A+V VL+LL          ++RL   + +  L +A   ++ M +    G
Sbjct: 270 LTALVTAISI-ALVSVLVLLA------RDTRRRL---RAERDLADALAFRKAMEDSVITG 319

Query: 323 LLLIDGQGRIEEINPMAKRY--FSLSDSMVRQLQAWSLFDTGNPNATV-PLLLKNLTEHQ 379
           L   D QGRI  +NP       FS  + M    +A        P+A   P  L +  + +
Sbjct: 320 LRARDLQGRITYVNPAFCEMVGFSPEELMAGNAEA--------PDAPYWPTELAHEYQQR 371

Query: 380 ELADITN-------VETVARRSDGSLFPVLF--SLIAVSWKDRRHYLVTLIDISKRKKAE 430
           +   +          E+V  R DG+ FPVL   + +  + K +  ++   ID+S+     
Sbjct: 372 QARRLAGGMPPREGFESVFMRKDGTRFPVLIFEAPLINAHKVQTGWMSAFIDVSE----- 426

Query: 431 IALQNANRDLQQRVEERTAALKSAQQELIEAS-KMAALGRMSSAITHELNQPLTGLRTLL 489
                     Q+R+EE    L  A QE ++AS ++A +G M+S ++HEL QPL  + +  
Sbjct: 427 ----------QRRIEE----LSRASQERLQASARLATVGEMASLLSHELTQPLAAIASYA 472

Query: 490 SSNELLL---ERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAIS---LPD 543
           S +  LL    RG+   +    + +    DR   +   +  F   R    + ++   L D
Sbjct: 473 SGSLNLLGPHARGDQGEVAMAVRRIAEQADRAGQVIRSVHDFVRRRDRTREPVAPQALID 532

Query: 544 ALQEILRIHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAM-------SQ 596
           A+  ++R+ QAR   V + V     LP  M +   + QVL NL  NA+ AM       S+
Sbjct: 533 AVLPLVRL-QARKLGVIIEVVFEDRLPAAMCDRTLVEQVLLNLARNAMQAMDSPDNVGSR 591

Query: 597 TLEPKLSISA-----VSEEDQ--VIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLG 649
            L  +++ +A     V E+ +  +   V+D GCGI+ E+   +F PF T++   +G+GLG
Sbjct: 592 VLRLRVARAAAVGGTVQEDGRRWLEFSVADLGCGISDEVAERLFTPFFTTR--ADGMGLG 649

Query: 650 LAIVANSLRDMQGSIVATNNPDAGMSFEIRLRAA 683
           L++    +    G++V   N   G  F   L AA
Sbjct: 650 LSLCRTVVEQHGGALVFEPNKPRGTVFRFTLPAA 683