Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (354), Expect = 2e-37
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 32/399 (8%)

Query: 307 EAEERQR----NMINKTHVGLLLIDGQGRIEEINPMAKRYFSLSDSMVRQLQAWSLFDTG 362
           + EE +R    ++IN T   L+  D  G+IE  NP A     L +S+ + L  WS F   
Sbjct: 390 KVEEMERTNALSLINNTQASLITCDRYGQIESANPSAMATLRL-ESLAQPLTLWSCFAKH 448

Query: 363 NPNATVPLLLKNLTEHQELADITNVET------------VARRSDGSLFPVLFSLIAVSW 410
                  L  K     Q+ A+   +              + R S G    ++ ++  V+ 
Sbjct: 449 VQPKVGQLFDKKGNLIQKGAESLTLSLGNPEKPHYLRLYLRRYSQGLHDKIIVTITDVTD 508

Query: 411 KDRRHYLVTLIDISKRKKAEIALQNANRDLQQRVEERTAA---LKSAQQELIEASKMAAL 467
           ++  + L+      + K+   +L+  NR+LQ  VEER  A   LK  Q ELI+A+KMA +
Sbjct: 509 QEHANRLLE----QRVKEKTQSLREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVV 564

Query: 468 GRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKS 527
           G+  +++ HELNQPL+ +   L S  L LE      L  +   + +L +RM  + + L+ 
Sbjct: 565 GQTMTSLAHELNQPLSAMSAYLFSARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRH 624

Query: 528 FA--FNRPDALQAISLPDALQEILRIHQARLTPVDVRV--RLSSDLPLVMGEEQRLRQVL 583
           FA   +  ++LQ + L   +++ L + Q +     +++   L  DL +VM +   L QVL
Sbjct: 625 FARKNSSDESLQPVRLNSVVEQALVLVQTKAKRQQIKLINTLPDDL-MVMADALSLEQVL 683

Query: 584 GNLVSNALDAMSQTLEPKLSISAV-SEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKM 642
            NL+ N  DA +   +P + + A+ +E+    + V D+G G   E++  +F PF T+K++
Sbjct: 684 INLIVNGCDASTTFAQPWVKLIALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEV 743

Query: 643 GEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRLR 681
             GLGLGL+I  + +  MQG I   +N + G    + L+
Sbjct: 744 --GLGLGLSICQSLVEKMQGRIALASNLEKGAMVILELQ 780