Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  139 bits (349), Expect = 5e-37
 Identities = 83/263 (31%), Positives = 150/263 (57%), Gaps = 6/263 (2%)

Query: 424 SKRKKAEIALQNANRDLQQRVEERTAALKSA---QQELIEASKMAALGRMSSAITHELNQ 480
           ++  + E  + +  R+L++ +EER A+   A   ++ L +A+++A+LG++++ I HE  Q
Sbjct: 326 ARTSELEAMVTDRTRELRREMEERAASETRADTLREGLRQANRLASLGQITAGIAHETAQ 385

Query: 481 PLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAIS 540
           P+  +R+  ++  LL+ RG+++    N   +  L DR+  +T++L+ F+     A+ AI 
Sbjct: 386 PVAAIRSYAANGRLLIARGDSEAAAENMAAIERLTDRIGKVTAELRGFSRKATGAIDAIP 445

Query: 541 LPDALQEILRIHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEP 600
           L   ++  + I ++RL  VD+ +    D   VM +  RL QVL NL+ NAL+A+     P
Sbjct: 446 LAGPIEGSVLILKSRLARVDLHLPDLPDDLRVMADTIRLEQVLVNLLQNALEALEGVTAP 505

Query: 601 KLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDM 660
            + +S   + + V++ V DNG GI P +   +F PF TS+    GLGLGL I ++ + DM
Sbjct: 506 TIRLSVALDAETVLLSVIDNGPGIDPSVQGQLFTPFVTSRP--SGLGLGLVIASDIMADM 563

Query: 661 QGSIVATNNPDAGMSFEIRLRAA 683
            GS+    + + G  F++ L+ A
Sbjct: 564 GGSLRLLPS-EVGAHFQLSLKRA 585



 Score = 38.9 bits (89), Expect = 7e-07
 Identities = 68/324 (20%), Positives = 116/324 (35%), Gaps = 71/324 (21%)

Query: 4   NKASWIVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYL 63
           N+  WI L + +   + W S  V+E   + +         +   + ++  + RF  LP  
Sbjct: 8   NRILWIALFLGVAGGLLWLSGEVAERNAIARLSAETRGAAILRQAYLKSEIERFRLLPIA 67

Query: 64  MTNEANTLKLFQGDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENW---- 119
           ++++++ +    G       L ++L  L +       Y+L  SG  + +S    NW    
Sbjct: 68  LSDDSDLVAGLTGSQAALRALDRKLQALARTTGAAQIYVLDASGRTVASS----NWGSER 123

Query: 120 -------------KLS----DGKAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVE 162
                        KL+     G       + +R G+ +  +S G                
Sbjct: 124 SFVGQDYSFRNYFKLAAAHGSGAQFALGTISERPGMYLSRRSRGG--------------- 168

Query: 163 IVGAVAVQVDLNVLADQWFASDELILFQNSQRHYFLSSSSVYSADWIAT--HPEVVAAAQ 220
             G V V+++ + +  QW    E I F  S+    L +S     DW  T  HP    A Q
Sbjct: 169 --GYVVVKLEFDGIEQQWARLGE-ITFITSREGIILITSR---PDWRFTTIHPLSAQAKQ 222

Query: 221 K-----------------RSLFDGTRLTLWQVEQAP---YLAQSVTLDDLNWTLTYLTPL 260
           +                 R + D     +      P    L QSV   +  W L  LTPL
Sbjct: 223 RFRAELQSGRGSLLPVPLRGMGDADGRQIVSPADEPRRRLLWQSVAAGEPGWQLNMLTPL 282

Query: 261 KNLNATVNWISTSAMVGVLLLLLL 284
             +    +++ T  +  +LLLLLL
Sbjct: 283 HGVE---SFVRTVRLATLLLLLLL 303