Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., C4-dicarboxylate transport sensor protein from Pseudomonas putida KT2440

 Score =  164 bits (414), Expect = 1e-44
 Identities = 101/250 (40%), Positives = 151/250 (60%), Gaps = 2/250 (0%)

Query: 423 ISKRKKAEIALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGRMSSAITHELNQPL 482
           +S+R +     Q + ++L+++VEERT  L++AQ+ L++++K+AALG+MS+A+ HE+NQPL
Sbjct: 319 VSQRLRLARLRQRSRQELERQVEERTRELRTAQEGLVQSAKLAALGQMSAAMAHEINQPL 378

Query: 483 TGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDAL-QAISL 541
           T  R  L +  LLL+ G     +   + +  ++ RMAA+TS LK+FA N P  L + + L
Sbjct: 379 TTQRMQLETLRLLLDHGRHDEARQALEPLEQMLTRMAALTSHLKTFARNSPMGLRERLDL 438

Query: 542 PDALQEILRIHQARLTPVDVRVRLSSDLPL-VMGEEQRLRQVLGNLVSNALDAMSQTLEP 600
              + + L + +ARL   +V V L    P  V G+  RL QVL NL+ NALDAM      
Sbjct: 439 ATVVDQALHLLEARLRNEEVEVALYLARPAWVRGDAIRLEQVLINLLHNALDAMLDKRYK 498

Query: 601 KLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDM 660
           +L I    +ED   + V D+G GIA   L  +F+PF T+K +GEGLGLGLAI    + + 
Sbjct: 499 RLEIRIEPDEDLWRLSVLDSGGGIAEADLAKVFDPFFTTKPVGEGLGLGLAISYGIVHEA 558

Query: 661 QGSIVATNNP 670
            G + A N P
Sbjct: 559 GGQLRAENLP 568



 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 71/347 (20%), Positives = 139/347 (40%), Gaps = 54/347 (15%)

Query: 12  VILLLIAVRWGSHAVSENWQLRQAQRHG--------EQRLLDYISDVRRTLSRFYHLPYL 63
           +I LLI +     A+S  W + QA+R           Q+L  Y + +   + R+  LP +
Sbjct: 12  LITLLIVL---GTALSAGWAMHQAKRQAMEDDAKRASQQLGLYANALHTLIDRYRALPAV 68

Query: 64  MTNEANTLKLFQG--DDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKL 121
           +  +   +   +G  D++ Q  L  +L +++ AAN+    +L  +G  + AS    NW+L
Sbjct: 69  LALDPELIAALRGPVDEKVQNALNLKLERINGAANSSTLELLDRTGLAIAAS----NWRL 124

Query: 122 SDG--------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDV-EIVGAVAVQVD 172
                      +    +   Q  G           P YF+A+ V  +    +GA+ V+++
Sbjct: 125 PSSYVGSNYGFRPYFKQTRSQGSGRFYAVGVTSGVPGYFLASAVNDEHGRFLGAMVVKLE 184

Query: 173 LNVLADQWFASDELILFQNSQRHYFLSSSSVYSADWIATHPEVVAAAQKRSLFDGTRL-- 230
              L  +W   ++++L  +++   F+++       W     + ++ A +  L +  +   
Sbjct: 185 FPELEREWRQGNDILLVSDARGITFIANQD----GWRYRELQPLSGADRADLAETRQYDK 240

Query: 231 ------------------TLWQVE----QAPYLAQSVTLDDLNWTLTYLTPLKNLNATVN 268
                             TL +V+       YL +S+ L+  NWTL  L   +      N
Sbjct: 241 QPLVPLHHQVLTRFAPYSTLSRVQGPEGSTEYLWESLPLEGENWTLHLLRKPQVAADGRN 300

Query: 269 WISTSAMVGVLLLLLLMRLRYEQYQKRLSEAKIQHVLFEAEERQRNM 315
               +A V + L+   + +       RL +   Q +  + EER R +
Sbjct: 301 AALGAAAVWLSLVFAALFVSQRLRLARLRQRSRQELERQVEERTREL 347