Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

 Score =  171 bits (433), Expect = 1e-46
 Identities = 113/323 (34%), Positives = 177/323 (54%), Gaps = 33/323 (10%)

Query: 384 ITNVETVARRS--DGSLFPVLFSLIAV---SWKDRRHYLVTLIDISKRKKAEIALQNANR 438
           +T ++ + R S   G L  V F+L+A+   +W +RR  + T      R  A  AL+ AN 
Sbjct: 307 LTPLQDLRRESMVQGILVGVAFALLAILGIAWNERRKVIAT------RLAAREALEEANS 360

Query: 439 DLQQRVEERTAALKS---------------------AQQELIEASKMAALGRMSSAITHE 477
            L++R+ ERTA L++                     AQ EL++A K+AA+G+MS++I HE
Sbjct: 361 QLERRIAERTADLRASNERLKGQIRERRHAEQTLRHAQDELVQAGKLAAIGQMSTSIAHE 420

Query: 478 LNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQ 537
           LNQPL  LRTL  +    LERG  +    N + ++ LIDRM  +T+ L+SFA    D+ Q
Sbjct: 421 LNQPLAALRTLSGNTVRFLERGALETASTNLRTMNDLIDRMGRITASLRSFARRGDDSGQ 480

Query: 538 AISLPDALQEILRIHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAMSQT 597
           A SL  A++  L++   R++   +++    +   +  ++ RL Q+L NL+ NALDAM+  
Sbjct: 481 A-SLAKAVEATLQVLANRISACHLQLHHQFEDQQLAIDQTRLEQILVNLIGNALDAMAAQ 539

Query: 598 LEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSL 657
            +P+L +    + D+  ++V DNG GI PE    +FEPF T+K    GLGLGL + A+  
Sbjct: 540 PQPELWLEGELQGDKYRLQVRDNGHGIDPEARKHLFEPFFTTKPGEHGLGLGLTLSASLA 599

Query: 658 RDMQGSIVATNNPDAGMSFEIRL 680
              +GS+   +    G +F + L
Sbjct: 600 AAAKGSLNVEHPVTGGTAFVLAL 622



 Score = 59.7 bits (143), Expect = 4e-13
 Identities = 67/309 (21%), Positives = 127/309 (41%), Gaps = 42/309 (13%)

Query: 11  LVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEANT 70
           L+ILL++ +    + +SE+  +R    +GE++L  +   V   +S++ +LP L+  E + 
Sbjct: 29  LIILLMVGLGMAGYLISESNGIRTLSENGERQLELHARTVESEISKYTYLPSLLELEDSV 88

Query: 71  LKLFQGDDRPQAQ-LQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG----- 124
             L    D    Q + + L  L++ + ++  ++L  +G +   S    NW+ +D      
Sbjct: 89  SHLLTDPDGASRQTVNEYLEGLNRRSRSRAIFVLDTNGRVQATS----NWRDADSFLGED 144

Query: 125 ---KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLADQW- 180
              +A     ++   G      S      Y++A  +    +I+G   ++V L+ L ++W 
Sbjct: 145 LSFRAYFQTAVRGEPGRFYGIGSTTGEAGYYLAHGLEEHGKIIGVAVIKVRLDTLEERWQ 204

Query: 181 ------FASDE--LILFQNSQRHYFLS------------SSSVYSADWIATHPEVVA--- 217
                 F SDE  +I+  +       S            + S+    W     + +A   
Sbjct: 205 RARLEAFVSDENGIIILSSDPARRLKSVRPLTPQIKERLARSLQYYWWPLNELQPLARET 264

Query: 218 ---AAQKRSLFDGTRLTLWQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSA 274
                +K +    T     +  +  YLAQ+  L D  W  T LTPL++L      +    
Sbjct: 265 LADGVEKLTFPANTETAHGKPHEVAYLAQTRRLVDTPWHFTLLTPLQDLRR--ESMVQGI 322

Query: 275 MVGVLLLLL 283
           +VGV   LL
Sbjct: 323 LVGVAFALL 331