Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

 Score =  170 bits (430), Expect = 2e-46
 Identities = 115/315 (36%), Positives = 176/315 (55%), Gaps = 21/315 (6%)

Query: 386 NVETVARRSDGSLFPVLFSLIAVSWKDRRHYLVTLIDISKRKKAEIA---------LQNA 436
           +V+TV     G+L  VL  L  +  + RRHY +  ID   R + E+          L+  
Sbjct: 280 SVQTVMAIGAGTLL-VLMLLAGLVMQRRRHY-IDRIDFEARGRQELEKRVAERTADLEGL 337

Query: 437 NRDLQQRVEERTAALKSA---QQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNE 493
           N  L+  V ER  A + A   Q EL++A K++ LG MS++I+HELNQPL  +R+   + E
Sbjct: 338 NTRLKNAVLERENAQQEAVRAQDELVQAGKLSVLGTMSASISHELNQPLAAIRSYAENAE 397

Query: 494 LLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQ 553
           +LL+   T+  + N KL+  L  RMA++ + L++FA     A ++++L  AL + L +  
Sbjct: 398 ILLDHQRTEDARGNLKLIGELTGRMASIIAHLRAFARRDRHAPESVALQPALDDALALLA 457

Query: 554 ARLTPVDVRVRLSSDLP----LVMGEEQRLRQVLGNLVSNALDAMSQTLEP-KLSISAVS 608
            R     + V L  DLP     V   E RLRQVLGNL++NALDA+++   P +L +SA  
Sbjct: 458 KRRRA--MAVELIRDLPEATLWVQAGETRLRQVLGNLLANALDALTEKANPRRLWLSAEQ 515

Query: 609 EEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATN 668
            +D V + + DNG G + + L    EPF T+K   +GLGLGLAI  + +R + G ++  N
Sbjct: 516 RDDCVYLYIRDNGPGFSRQALEHAKEPFFTTKTRTQGLGLGLAICESLMRALGGELLLAN 575

Query: 669 NPDAGMSFEIRLRAA 683
           +P+ G    ++LR A
Sbjct: 576 HPEGGAMLTLQLRVA 590



 Score = 55.8 bits (133), Expect = 6e-12
 Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 44/327 (13%)

Query: 9   IVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEA 68
           + L+ L+L  + W  H ++E +   +      Q L  Y++++  TL R+  LP ++ +  
Sbjct: 16  LALLALILAPLLWPLHHLAERYYQEELASQNRQTLDLYVANLLGTLHRYETLPQILGDLP 75

Query: 69  NTLKLFQGDDRPQA--QLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG-- 124
               +     R +A     + L  + +    +  Y++ +SG+ L AS    NW   D   
Sbjct: 76  ALRGVLADPFRLEAVTNANRLLKDIVQKTGAEVMYLMDVSGNTLAAS----NWDKHDSFV 131

Query: 125 ------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLAD 178
                 +   ++ +    G      +  +   YF AA V     IVG + V+VDL+    
Sbjct: 132 GRNFAFRPYFNEAMAGHLGRFFGQGTTSAKRGYFFAAAVRDRERIVGVLVVKVDLDHTET 191

Query: 179 QWFASDELILFQNSQRHYFLSSSSVYSADWIATHPEVVAAAQKRSLFDGTRLTLWQVE-- 236
            W  + E +L  +      L+S      DW             R+L D  R  +  ++  
Sbjct: 192 LWGRTPEQLLLTDHNGVVILTS----RPDW--------RFRATRTLTDAERQAIIAIQPY 239

Query: 237 --QAP---------YLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSAMVGVLLLLLLM 285
             QAP         ++ Q+  + +  W ++ L P   ++ +V    T   +G   LL+LM
Sbjct: 240 PTQAPQPLVLNPQAWITQTRDIKETGWQVSILAPRTLVDRSV---QTVMAIGAGTLLVLM 296

Query: 286 RLRYEQYQKRLSEAKIQHVLFEAEERQ 312
            L     Q+R     I  + FEA  RQ
Sbjct: 297 LLAGLVMQRR--RHYIDRIDFEARGRQ 321