Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  108 bits (271), Expect = 4e-28
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 33/264 (12%)

Query: 450 ALKSAQQELIEASKMAALGRMSSAITHELNQPL--------------TGLRTLLSSNELL 495
           ALK+AQ +LI+  KMA+LGR+ + + HELN P+              T +   L +    
Sbjct: 182 ALKTAQAQLIQQEKMASLGRLIAGVAHELNNPISFVYGNVHALSKYSTRIAAYLDAIHAG 241

Query: 496 LERGETQLLKANTKLVHSLID-------------RMAAMTSQLKSFAFNRPDALQAISLP 542
            +  E + L+A+ ++  +L D             R+A +   LK  +F+     +   L 
Sbjct: 242 CDETEREALRASLRIDSTLADLPALMEGTAEGAQRVADIVRSLKRLSFSAGSKPEEFDLG 301

Query: 543 DALQEILRIHQARLTPVDVRVRLSSDLP---LVMGEEQRLRQVLGNLVSNALDAMSQTLE 599
           + + + ++   +    +     +  DLP    V G   +L QV+ NL+ NALDA++   +
Sbjct: 302 EVVAKAVQWSGSGKKGL---ASIELDLPDHLAVRGNPGQLHQVIVNLIENALDAVAGRPD 358

Query: 600 PKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRD 659
            ++ ++  +E  Q ++ ++DNG GI P+++  +F+PF T+K +G+G GLGL I    +RD
Sbjct: 359 GRVEVTGKAEGGQTVLTIADNGPGIPPDIVGKVFDPFFTTKPVGKGTGLGLWISYGIIRD 418

Query: 660 MQGSIVATNNPDAGMSFEIRLRAA 683
             GS+ A      G  F I L  A
Sbjct: 419 HGGSLEAGATASGGARFTISLPPA 442