Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  162 bits (410), Expect = 4e-44
 Identities = 99/282 (35%), Positives = 159/282 (56%), Gaps = 15/282 (5%)

Query: 416 YLVTLIDISKRKKAEIALQNANRDLQQRVEERTAAL--------------KSAQQELIEA 461
           +++ L+ + +R+    A  +A   L++ V +RT AL              +  Q ELI A
Sbjct: 313 FILLLLYLRQRRLVLKAKLDAKETLERLVAQRTEALSAEIVERQRTERHLRETQDELIHA 372

Query: 462 SKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAM 521
            KMAALG+MS+AI HELNQPL  ++T ++S+ + +ERG+ +   AN  ++  L  RMA +
Sbjct: 373 GKMAALGQMSTAIAHELNQPLAAIQTFVASSRIFVERGDAETAGANLTMIDDLCRRMADI 432

Query: 522 TSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTPVDVRVRLSSDLPL-VMGEEQRLR 580
              L+ FA   P A Q +    ++   + +   RL   DV +  +    L V G+  RL 
Sbjct: 433 IRHLRVFARKSPVASQVMDPAASVSRAVALLAVRLRQADVDLVWAPPQGLMVAGDPGRLD 492

Query: 581 QVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSK 640
           QV  NL++NA+DA++Q+   ++ + A++  + V++ V+D+G G+  ++   +FEPF T+K
Sbjct: 493 QVFVNLLANAVDAVAQSPARRIQVDAMAVGEDVVITVADSGPGLTSDVADRVFEPFFTTK 552

Query: 641 KMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRLRA 682
            +GEGLGLGL++    +RDM GSI   N    G  F I L A
Sbjct: 553 DVGEGLGLGLSLSYGIIRDMGGSIRVENRSGGGAVFLISLPA 594



 Score = 78.6 bits (192), Expect = 8e-19
 Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 45/323 (13%)

Query: 14  LLLIAVRWGSHAVSENWQ------LRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNE 67
           LLL+A   G   V+  +Q      L  A   G+QRL  Y S +R  L RF +LP  M  +
Sbjct: 19  LLLLAALLGGLVVAWVYQRARIEALDGALVMGQQRLGLYASTIRAALDRFSYLPATMALD 78

Query: 68  ANTLKLFQGDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG--- 124
              +++  G     A L  +L  ++  A +   Y++   G  + AS    NW+       
Sbjct: 79  REVIEVLGGHPSQAAALSAKLETINAGARSASLYVMDRRGVTVAAS----NWRTETSYVG 134

Query: 125 -----KAIIHKILQQRE----GISIVTKSVGSTPTYFVAAPV-YLDVEIVGAVAVQVDLN 174
                +    +++        GI + TK     P YF+A+ V     EI+G+V V++DL 
Sbjct: 135 NDYSFRPYFTQVMTTGTGRFFGIGVTTK----LPGYFLASAVRTASGEIIGSVVVKIDLE 190

Query: 175 VLADQWFASDELILFQNSQRHYFLSSSSV--YSADWIAT-------------HPEVVAAA 219
            L + W   D  ++  +      L+S  +  Y+ D   T                 +   
Sbjct: 191 TLEEDWGGGDGAVMVTDEDGMVILTSRPLWKYAVDGPVTTELRRKLDATQRYGAVPLRPL 250

Query: 220 QKRSLFD-GTRLTLWQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSAMVGV 278
           ++++L   G    L QV ++ ++AQS  LD+  W + YL   + + + V   ST+A+ G+
Sbjct: 251 ERQALLQLGETARLEQVGESAFVAQSQALDEEGWAIHYLADWEVMESNVR--STAALAGL 308

Query: 279 LLLLLLMRLRYEQYQKRLSEAKI 301
             +  ++ L Y + ++ + +AK+
Sbjct: 309 GWVAFILLLLYLRQRRLVLKAKL 331