Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  100 bits (249), Expect = 2e-25
 Identities = 99/391 (25%), Positives = 169/391 (43%), Gaps = 62/391 (15%)

Query: 312 QRNMINKTHVGLLLIDGQGRIEEINPMAKRYFS-LSDSMVRQLQAWSLFDTGNPNATVPL 370
           ++ M +   VG+   D +GRI  +NP         +D +V                TVP 
Sbjct: 292 RKAMEDSLTVGMRARDLEGRITYVNPAFCHMVGWTADELV---------------GTVPP 336

Query: 371 LL----KNLTEHQEL--------ADITNVETVARRSDGSLFPVLFSLIAVSWKDRRH--Y 416
           +L    ++L    EL        A     E V RR +G  F  L     +   D RH  +
Sbjct: 337 MLYWVPEDLEHTYELHRAVMRGEAPAEGFELVFRRKNGERFSALIYEAPLIDSDGRHTGW 396

Query: 417 LVTLIDISKRKKAEIALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGRMSSAITH 476
           + +++DI++RK+AE                     +  Q++L   +++  +G M+S + H
Sbjct: 397 MASVLDITERKRAE------------------ELSRQHQEKLQHTARLITMGEMASTLAH 438

Query: 477 ELNQPLTGLRTLLSSNELLLERGET---QLLKANTKLVHSLIDRMAAMTSQLKSFAFNRP 533
           ELNQPL+ + +  +     L  G+    +L+   TKL  +   R   +  ++  F     
Sbjct: 439 ELNQPLSAIASYATGCLNRLSAGDARPEELVPPLTKL-GAQAQRAGQIIRRIHDFVRKSE 497

Query: 534 DALQAISLPDALQEILRIHQARLTPVDVRVRLSSDL------PLVMGEEQRLRQVLGNLV 587
             +    L + ++ ++   +       +R+ L   L      P V  +   + QV+ NLV
Sbjct: 498 PLVVPCLLDEIIEGVVGFLEPDARKRGIRIDLDLSLTPGAARPRVEADHILIEQVILNLV 557

Query: 588 SNALDAMSQTLEP--KLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEG 645
            NA++AM  T  P  +L+IS    + Q  +RV+D G GI PE+   +F PF T+K+   G
Sbjct: 558 RNAMEAMGHTPRPQRRLTISLQCADGQARIRVADRGTGIPPEIAANLFSPFFTTKE--TG 615

Query: 646 LGLGLAIVANSLRDMQGSIVATNNPDAGMSF 676
           +G+GL I  + +   +G +    NP  G  F
Sbjct: 616 MGMGLNICRSIVEAHRGHLWFEENPGGGSVF 646