Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., C4-dicarboxylate transport sensor protein DctB from Azospirillum sp. SherDot2

 Score =  172 bits (436), Expect = 4e-47
 Identities = 100/254 (39%), Positives = 151/254 (59%), Gaps = 9/254 (3%)

Query: 439 DLQQRVEERTAALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLER 498
           +L+++VEERT  L++AQ EL+ A K+A +G++S+ + HELNQPL  LRTL  +    L+R
Sbjct: 353 ELERKVEERTRNLRAAQDELVHAGKLAVIGQLSAGLAHELNQPLAALRTLSGNTVKFLQR 412

Query: 499 GETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTP 558
           G  +  + N + +  L+D M A+TSQLKSFA     A + +++   +   L +   RL  
Sbjct: 413 GNLEAAQGNLERIAHLVDSMGALTSQLKSFARKSSGAPRPVAVRRPIDNALFLLDQRLRR 472

Query: 559 VDVRVRLSS-DLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRV 617
             V V + + D    + +  RL QVL NL++N LDA++     +L+++A +E D+V + V
Sbjct: 473 SGVAVEVDAPDDVAALCDPNRLEQVLVNLLANGLDALAGRTGSRLTLTARTEGDRVRIEV 532

Query: 618 SDNGCGIAPELLTTMFEPFQTSKKM--------GEGLGLGLAIVANSLRDMQGSIVATNN 669
           +DNG G+  E+L  +FEPF T+K+           GLGLGLAI A  +RD  G++   N 
Sbjct: 533 ADNGPGLPAEVLPRLFEPFFTTKEAVKDGTKEGSGGLGLGLAISAGIVRDFGGALTGANG 592

Query: 670 PDAGMSFEIRLRAA 683
           PD G  F I L AA
Sbjct: 593 PDGGAVFTIDLPAA 606



 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 100/430 (23%), Positives = 165/430 (38%), Gaps = 78/430 (18%)

Query: 26  VSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEANTLKLFQGDDRPQAQLQ 85
           VSE   L   Q  G  RL  Y   + R + ++ + P  +  E + L L  G       L 
Sbjct: 48  VSEGMGLATLQETGHHRLDLYAESLEREIDKYAYFPATLGLERDVLDLVAGRAPLAWGLN 107

Query: 86  QQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG--------KAIIHKILQQREG 137
           + L +L++ A T   Y+L   G +L AS    NW   D         +    +    R+G
Sbjct: 108 RYLERLNERAGTLSIYVLNRQGRVLAAS----NWNRPDSFINEDLSYRPYFIEAAAGRQG 163

Query: 138 ISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLADQWFASDELILF-------- 189
                 +      Y++++P+  D  IVG   V+V L  L   W   +  +L         
Sbjct: 164 RFFGVGTTRGEAGYYLSSPLTEDGAIVGVAVVKVSLEQLEQSWSTVEAPVLVADENGVVI 223

Query: 190 ----------------QNSQRHYF---------LSSSSVYSADWIATHPEVVAAAQKRSL 224
                           + ++RH+          LS   +   D IA+  E+V  ++    
Sbjct: 224 LASVPSWKFTTLRPMDEPTRRHFDRTLQYNARPLSPLGLMRQDRIASDAELVRLSRPA-- 281

Query: 225 FDGTRLTLWQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWIST------SAMVGV 278
            DG            +LAQ+  L    WT+T L+P+  +   + W         SA+ G+
Sbjct: 282 -DGQLEETVFPVSGGFLAQTAPLQGTGWTMTVLSPVDQVTG-MAWTRAALAAMGSAVPGI 339

Query: 279 LLLLLLMRLRYEQYQKRLSEAKIQHVLFEAEERQRNM----INKTHVGLLLIDGQ---GR 331
           LLL+ + R R+    +R           + EER RN+        H G L + GQ   G 
Sbjct: 340 LLLMWVQRRRHLHELER-----------KVEERTRNLRAAQDELVHAGKLAVIGQLSAGL 388

Query: 332 IEEINPMAKRYFSLSDSMVRQLQAWSLFDTGNPNATVPLLLKNLTEHQELADITNVETVA 391
             E+N       +LS + V+ LQ  +L         +  L+ ++      A  + +++ A
Sbjct: 389 AHELNQPLAALRTLSGNTVKFLQRGNLEAAQGNLERIAHLVDSMG-----ALTSQLKSFA 443

Query: 392 RRSDGSLFPV 401
           R+S G+  PV
Sbjct: 444 RKSSGAPRPV 453