Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  111 bits (277), Expect = 2e-28
 Identities = 104/386 (26%), Positives = 167/386 (43%), Gaps = 42/386 (10%)

Query: 311 RQRNMINKTHVGLLLIDGQGRIEEINPMAKRYFSLSDSMVRQLQAWSLFDTGNPNATVPL 370
           R     N T + +  +DG+GRI  IN    + FS                 G  +    +
Sbjct: 341 RFTRFFNNTPMAIASLDGEGRILRINAPFLKLFSGV--------------VGRDDIDRGV 386

Query: 371 LLKNLTEHQELADITNVETVARRSDGSLFPVLFSLIAVSWKDRRHYLVTLIDISKRKKAE 430
            L+ +    E   +      A+   G + P      +   +  R Y+  +ID       E
Sbjct: 387 ALETVLHDNEKPRLEQALAEAKDRQGDIAPFDSRHPSDEGRHFRFYVNAVIDQDDEAPEE 446

Query: 431 IALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLS 490
           +A+  A    +Q         K+ + ++ +  KM A+G ++  I H+ N  LT +  LLS
Sbjct: 447 VAIVYAIEVTEQ---------KALETQMAQTQKMNAVGTLAGGIAHDFNNVLTAI--LLS 495

Query: 491 SNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILR 550
           S+ LLL+        A+   +    +R A +  QL +F+  +      ++L D + + LR
Sbjct: 496 SDHLLLQARPADPSFADLMEIKRNANRAAVLVRQLLAFSRKQTMRPAVLNLTDVIGD-LR 554

Query: 551 IHQARL---TPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAV 607
           +   RL   T V + V    DL  V  +  +  QVL NL  NA DAM    +  +    V
Sbjct: 555 MLVDRLISGTNVKLEVDYGRDLWPVKTDLSQFEQVLINLCVNARDAMPDGGKITIRTRNV 614

Query: 608 SE-------------EDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVA 654
            E             ED V+V V+DNG GI PE++  +FEPF T+K++G+G GLGL++V 
Sbjct: 615 DEKEIAALGRPEFPAEDMVMVEVADNGTGIPPEIMDKIFEPFFTTKEVGKGTGLGLSMVY 674

Query: 655 NSLRDMQGSIVATNNPDAGMSFEIRL 680
             ++   G I   +    G +F I L
Sbjct: 675 GIVKQSGGYIYPESEVGKGTAFRIYL 700