Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  156 bits (395), Expect = 2e-42
 Identities = 96/293 (32%), Positives = 160/293 (54%), Gaps = 13/293 (4%)

Query: 404 SLIAVSWKDRR-------HYLVTLIDISKRKKAEIA-LQNANRDLQQRVEERTAA---LK 452
           +LIA   + RR       H      ++ +R +   A L   N++++  + ER      L+
Sbjct: 321 ALIAAMLQRRRRLRERLTHQAEAQAELERRVEERTADLARVNQEIKHEIAERRQTEKQLR 380

Query: 453 SAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVH 512
             Q +L++A K+AALG+MS+A++HE NQPL   +    +  LL+ERG  + +  N + + 
Sbjct: 381 KMQNDLVQAGKLAALGQMSAALSHEFNQPLAAAKNYAENASLLVERGRLEEVTENLRRIS 440

Query: 513 SLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTPVDVRVRLS-SDLPL 571
            LIDRMA+++  L++FA    +   A+ L   +++ L I   RL   D  + +    +PL
Sbjct: 441 GLIDRMASISKHLRNFARKPNEKTAAVGLETVIRDTLEIVGPRLKAADAMLDIDLGPVPL 500

Query: 572 -VMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLT 630
            V     RL+QVL N++SNA DA+    + ++S+  V     V + + D+G G+   +  
Sbjct: 501 AVKAGPVRLQQVLVNIISNAADAVEGREDRRISLQTVQHGQAVSIFIRDHGPGVPAAISE 560

Query: 631 TMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRLRAA 683
            +F+PF T+K +G GLGLGL+I  N ++D  G +   N+ ++G  FEI L AA
Sbjct: 561 RIFDPFFTTKGVGRGLGLGLSISYNIIKDFGGQLRVKNHEESGAEFEIELPAA 613



 Score = 47.0 bits (110), Expect = 3e-09
 Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 40/342 (11%)

Query: 5   KASWIVLVILLLI----AVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHL 60
           K  WI+L+ L L     AV  G   ++E++   +    G   L   +S +   LSR+  L
Sbjct: 16  KYRWILLMFLGLGLGYGAVTRGGGIIAESY-FGEMSDQGHTTLRLAVSALGGLLSRYEPL 74

Query: 61  PYLMTN--EANTLKLFQGDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAEN 118
           P L+ +  +   L     D+  + +    L  ++    +   YI+TL G  + AS N + 
Sbjct: 75  PALIADHDDIEELVAHPKDEALRQRANVYLKSINTLLESSDIYIITLDGETIAAS-NYDG 133

Query: 119 WKLSDGKAIIHKILQQ--REGISIVTKSVGSTPT---YFVAAPVYLDVEIVGAVAVQVDL 173
                G+   ++   Q   +G+     ++G+T     Y+ +AP+  + EI G +  +VD+
Sbjct: 134 PTSFVGENFSYRPYFQDAAKGLKSRFFALGTTSHKRGYYFSAPILFNEEIKGVIVFKVDI 193

Query: 174 NVLADQWFASDELILFQNSQRHYFLSSSS--VYSADWIATHPEVVAAAQKRSLFDGTRLT 231
             +   +   +  IL  + +   F++ +   +YS     T PE +A  +    +    LT
Sbjct: 194 EGIEASFGDGENRILVSDPEGIIFMTGTPQWLYSGLMPLT-PERLARTEASRRYANATLT 252

Query: 232 -------------LWQVEQ----APYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSA 274
                        L  + Q      Y+  S  + D  WT++ L    +L   V     +A
Sbjct: 253 ELPLKNGNFGSHQLMTIAQNDGDREYMVLSQPMQDAGWTVSVLMDTGSLRTQVK----TA 308

Query: 275 MVGVLLLLLL---MRLRYEQYQKRLSEAKIQHVLFEAEERQR 313
           M+ ++L L L   +     Q ++RL E        +AE  +R
Sbjct: 309 MIAIILCLCLAAALIAAMLQRRRRLRERLTHQAEAQAELERR 350