Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  220 bits (561), Expect = 3e-62
 Identities = 128/332 (38%), Positives = 193/332 (58%), Gaps = 7/332 (2%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           MATMKD+A+LAGVST+TVS  +     VS    +RV  A  +  Y+P++LAR+L+ N +K
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
           TI  +V    +P+F E+++G+E +    GY ++L ++    +R  + +N +  K+ DG+L
Sbjct: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 121 LMCSTLEGERLDVFD-RYPDIPIVVM--DWGPILFASDKIQDNSLQGGYMAAKHLIECGH 177
           L+ + L     DV      ++P +VM  ++ P L       DN L   + A  +L + GH
Sbjct: 121 LLGTDLP---FDVSKPEQKNLPPMVMACEFAPELELPTVHIDN-LTSAFEAVNYLTQLGH 176

Query: 178 KEIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGK 237
           K I  I+GP      Q R++GY++AL  AGI +NP +    DF  E G +A  +L    +
Sbjct: 177 KRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPE 236

Query: 238 LPSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLG 297
            P+A+F  ND MA+G IQ A + GLRVP DLS++G+DD+  A++  P LTTI QP+Y +G
Sbjct: 237 QPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIG 296

Query: 298 KAAVDTLLYRLENPDTTAQVVQLEPTLVVRNS 329
           + A+  +L  L   D  A    LE  LVVR S
Sbjct: 297 RQAMLMMLELLRGHDVRAGSRLLETKLVVRES 328