Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

 Score =  167 bits (423), Expect = 4e-46
 Identities = 110/309 (35%), Positives = 161/309 (52%), Gaps = 5/309 (1%)

Query: 3   TMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTKTI 62
           T+ D+A+ AGVS  TVS VIN  + V     E+V  A   LNY+PSA ARSL       I
Sbjct: 14  TINDVAKHAGVSPMTVSRVINGEQVVRAATKEKVEAAIAALNYSPSAAARSLAGGDETRI 73

Query: 63  GMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLLLM 122
           G+L +  +  +  E + G        G +L++   + +   +KA ++ L++ R+DG++L 
Sbjct: 74  GLLYSNPSASYLSEFLVGSLDQSSRAGIDLVVEKWD-EQTAVKAVVDHLVRGRIDGVVLP 132

Query: 123 CSTLEGERLDVFDRYPDIPIVVMDWG--PILFASDKIQDNSLQGGYMAAKHLIECGHKEI 180
               + E +    R   IP VV+  G  P   A+  I D      Y   +HLI  GH  I
Sbjct: 133 PPLCDHEAMIDALREAGIPAVVVATGHAPASLAAVSIDDRG--AAYEMTRHLIGLGHNRI 190

Query: 181 GCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLPS 240
           G I G      ++ RY+GY RAL EAGIA++   + +  F    G  A E +  R   P+
Sbjct: 191 GFIKGHPNLSASEERYQGYIRALGEAGIALDDALVEQGFFTYRSGLDAAEHILARDNPPT 250

Query: 241 ALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKAA 300
           A+F SND MA   +  A + GL VP DL++ G+DD  +A  + P LTTI QP   + +AA
Sbjct: 251 AIFASNDDMAAATVAIAHRNGLDVPGDLTVCGFDDTSLATTIWPELTTIRQPISAMSRAA 310

Query: 301 VDTLLYRLE 309
           VD L+  ++
Sbjct: 311 VDLLVRHIK 319