Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  251 bits (640), Expect = 2e-71
 Identities = 131/332 (39%), Positives = 214/332 (64%), Gaps = 7/332 (2%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           MAT+KD+A LAG+S +TVSHV+NK+R VS+++  +V  A  +L+Y PSA+ARSLK   T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
           TIG+LV  S NP+F E+ +G+E +C   GY +ILCN++ + Q+ ++ +  LL+KR+DGL+
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 LMCSTLEGERLDVFDRYPDI--PIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHK 178
           +      G+  D+      +  P+V++D       +D ++ +  QG Y+A +HL+E GH+
Sbjct: 121 V---ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHR 177

Query: 179 EIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKL 238
           ++  I GP      Q+R  G++RA+AEAG  +    ++  DF   GG+ A  ++ + GK 
Sbjct: 178 DVAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKR 236

Query: 239 PSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGK 298
           PSA+F  NDM+  GV++AA++R + VP +LS+IG+DD+ +++++ P+LTT+ Q    LG+
Sbjct: 237 PSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGE 296

Query: 299 AAVDTLLYRLENP-DTTAQVVQLEPTLVVRNS 329
           +A   LL R+  P    A+   + P +V+R S
Sbjct: 297 SAASLLLTRIATPRQGAAEQRIVAPRIVLRES 328