Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  211 bits (537), Expect = 2e-59
 Identities = 117/334 (35%), Positives = 195/334 (58%), Gaps = 5/334 (1%)

Query: 2   ATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTKT 61
           ATMKD+A  A VST+TVS  +     VS     RV  AA+++ Y P  + R++K N ++T
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 62  IGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLLL 121
           I ++V    +PFF E+++G+E +  + GY +++ +    NQ+ K  I+ ++ K++DG+LL
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 122 MCSTLEGERLDVFDRYPDIPIVVM--DWGPILFASDKIQDNSLQGGYMAAKHLIECGHKE 179
           + S L  +     +   ++P +VM  ++ P L       DN L   + A  +L E GHK 
Sbjct: 130 LGSRLPFDAS--IEEQRNLPPMVMANEFAPELELPTVHIDN-LTAAFDAVNYLYEQGHKR 186

Query: 180 IGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLP 239
           IGCI GP        R +GY +AL   GI ++P +I   DF  E G +A ++L    + P
Sbjct: 187 IGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPP 246

Query: 240 SALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKA 299
           +A+F  +D+MA+G +  A ++GL+VP+DLS+IG+D++ + +F  P LTTI QP+Y +G+ 
Sbjct: 247 TAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGRE 306

Query: 300 AVDTLLYRLENPDTTAQVVQLEPTLVVRNSVRKL 333
           A+  LL +++     +    ++  L++R S R L
Sbjct: 307 AMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRAL 340