Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  376 bits (965), Expect = e-109
 Identities = 185/329 (56%), Positives = 237/329 (72%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           MATMKD+ARLAGVSTSTVSHVINK RFVS+ I  +V  A ++LNYAPSALARSLK+N+T 
Sbjct: 1   MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
           TIGML+T STNPF+ E+V+GVERSC+ +GY+L+LCNTEGD QRM  ++ TL+QKRVDGLL
Sbjct: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL 120

Query: 121 LMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHKEI 180
           L+C+       ++  RYP +P V+MDW P    SD IQDNSL GG +A ++LI+ GH  I
Sbjct: 121 LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRI 180

Query: 181 GCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLPS 240
            CITGPL +  A++R EGY+ A+  AG+ I   + V  DFE  GG+ A  +L      P 
Sbjct: 181 ACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQ 240

Query: 241 ALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKAA 300
           A+F  ND MA+GV QA  Q  L+VP D+++IGYDD+ +A FMTP LTTIHQPK  LG+ A
Sbjct: 241 AVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELA 300

Query: 301 VDTLLYRLENPDTTAQVVQLEPTLVVRNS 329
           +D L++R+  P    Q +QL P L+ R S
Sbjct: 301 IDVLIHRITQPTLQQQRLQLTPILMERGS 329