Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  168 bits (425), Expect = 2e-46
 Identities = 102/312 (32%), Positives = 171/312 (54%), Gaps = 8/312 (2%)

Query: 3   TMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTKTI 62
           T+ DIAR+AGVS STVS V+NK   +S E  E+V  A ++L Y P+ LAR+L  +    I
Sbjct: 4   TIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNKLARALTSSGFDAI 63

Query: 63  GMLVTTST-----NPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVD 117
            ++ T ST     NPFF EV+  +      +G+++IL  +    + ++   + + QK + 
Sbjct: 64  MVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNPAEDLQKCESKIKQKMIK 123

Query: 118 GLLLMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAKH-LIECG 176
           G++++ S  +       D+Y DIP+VV+      +A     D    G  +A    LIE G
Sbjct: 124 GIIMLSSPADESFFAQLDKY-DIPVVVIGKVEGQYAHVYSVDTDNFGDSIALTDALIESG 182

Query: 177 HKEIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRG 236
           H+ I C+  PL  H +  R  GYK++LA   IA+  +WIV+  +  E   +A  +L  + 
Sbjct: 183 HQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRDEWIVDGGYTHETALKAARQLLSQS 242

Query: 237 KLPSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRL 296
            LP A+F ++ +  M + +AA+++ + +P  L+++GY +  ++  +TPA   I  P   L
Sbjct: 243 PLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDVPTQEL 302

Query: 297 GKAAVDTLLYRL 308
           G+ + + LL+RL
Sbjct: 303 GQQSCE-LLFRL 313