Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Dickeya dianthicola ME23

 Score =  403 bits (1036), Expect = e-117
 Identities = 199/295 (67%), Positives = 254/295 (86%), Gaps = 1/295 (0%)

Query: 1   MRMKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLI 60
           M +KK+ TL+SA  LS +VS  A A+DT+A+V+STLNNPFFV++KDGA+ +A +LGYNL+
Sbjct: 1   MNLKKIATLVSAVALSAAVSANALAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLV 60

Query: 61  VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120
           +LDSQN+P+KELSNV+DLTVRG K +LINPTDS+AV NA+++AN++KIPV+TLDR A+ G
Sbjct: 61  ILDSQNNPAKELSNVQDLTVRGTKLLLINPTDSNAVGNAVKLANQAKIPVITLDRVAASG 120

Query: 121 EVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGSKMQ 180
           EV+SH+ASDN  GG++AG FI  K+G  AKVIQLEG+AGTSAARERG GF+ + + +K  
Sbjct: 121 EVISHVASDNAFGGKVAGDFIAKKLGEGAKVIQLEGLAGTSAARERGAGFIKSAEKNKFA 180

Query: 181 LLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK-SVMIVGFD 239
           +LASQPADFDRTKGLNVM+NLL A+PDV+AVFAQNDEMALGALRA+Q +G+  V++VGFD
Sbjct: 181 MLASQPADFDRTKGLNVMQNLLTAHPDVKAVFAQNDEMALGALRALQTAGRDDVLVVGFD 240

Query: 240 GTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIAK 294
           GT DG+ AVE G+LAATVAQ+P+ IG IG+ETADK+LKGEKV+  IPV LK++ K
Sbjct: 241 GTADGVKAVEGGKLAATVAQRPEQIGIIGVETADKVLKGEKVQPIIPVDLKLVTK 295