Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., ABC-type sugar transport system, periplasmic component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  173 bits (438), Expect = 5e-48
 Identities = 92/260 (35%), Positives = 153/260 (58%), Gaps = 3/260 (1%)

Query: 24  QAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVLDSQNDPSKELSNVEDLTVRGV 83
           + +  VA+++STLNNP+FV + + A  +A+ LGY + + DSQN+ + E ++ E+    G 
Sbjct: 29  ETKGKVAVIVSTLNNPWFVVLAETAAKEAESLGYEVSIFDSQNNTALENNHFENAITAGY 88

Query: 84  KAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEVVSHIASDNVVGGEMAGHFIEA 143
           +AIL NPTD++   + +  A+ + I V  +DR  +     S I SDN  G    G +   
Sbjct: 89  QAILFNPTDAEGSVSNVTKASEAGIAVFCMDREVNSSLPTSQILSDNYAGCVSLGKYFVD 148

Query: 144 KIGSDAKVIQLEGIAGTSAARERGEGFMNAV-KGSKMQLLASQPADFDRTKGLNVMENLL 202
           ++      +++ G+ G +    R +GF + V     ++++A Q ADFDR K + VME++L
Sbjct: 149 QLDKSGNYVEILGLVGDNNTWNRSKGFHSVVGHYPDLKMVAQQSADFDRNKAMEVMESIL 208

Query: 203 AANPDVQAVFAQNDEMALGALRAIQASG--KSVMIVGFDGTDDGIAAVERGQLAATVAQQ 260
             + D+ AVF  ND MA+GA +A++A+G    VM+ GFDG  D + AV+ G++AAT  Q 
Sbjct: 209 QVHRDIDAVFCGNDAMAMGAYQALKAAGLENQVMVFGFDGAADVVDAVKDGRIAATAMQF 268

Query: 261 PDMIGAIGIETADKMLKGEK 280
           P ++     + ADK ++GE+
Sbjct: 269 PKVMAKTAAQLADKYIQGER 288