Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  464 bits (1194), Expect = e-135
 Identities = 233/319 (73%), Positives = 278/319 (87%)

Query: 15  TTSDNRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVG 74
           T + + ++  +K WL+EQKSLIALL L+ +VS ++PNFFTV+NL NIL+QTSVNAI+AVG
Sbjct: 3   TQAVSGRRYFTKAWLMEQKSLIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVG 62

Query: 75  MTLVILTAGIDLSVGSVLALCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKG 134
           MTLVILT+GIDLSVGS+LAL GA AA++V +EV  LVAV  AL AGAA+GA++G+I+AKG
Sbjct: 63  MTLVILTSGIDLSVGSLLALTGAIAASIVGIEVNALVAVAAALAAGAAIGAVTGVIVAKG 122

Query: 135 KVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVV 194
           +VQAFIATLV M LLRGVTMVYT+G P++TGFTD AD F WFG G  LG+P PVW+M +V
Sbjct: 123 RVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIV 182

Query: 195 FAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRL 254
           F  AWY+L+HTR GRY+YA+GGNE+ATRLSGI+V++VKI VY++CGLLA+LAGII  +RL
Sbjct: 183 FLAAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARL 242

Query: 255 SSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQ 314
           SSAQPTAG GYELDAIAAVVLGGTSL GGKGRI+GTLIGALI+GFLNN LNLL VSSYYQ
Sbjct: 243 SSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQ 302

Query: 315 MIAKAVVILLAVLVDNKNK 333
           MI KAVVILLAVLVDNK +
Sbjct: 303 MIVKAVVILLAVLVDNKKQ 321