Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., ABC-type xylose transport system, permease component from Enterobacter asburiae PDN3

 Score =  206 bits (525), Expect = 6e-58
 Identities = 129/361 (35%), Positives = 194/361 (53%), Gaps = 64/361 (17%)

Query: 36  IALLFLVVVVSFL----NPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSV 91
           + +  ++V++ F     + ++ +  N+ N+LRQT++  I+AVGM  VI++A IDLSVGS+
Sbjct: 31  VMIAAIIVIMLFFTWMTDGSYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSM 90

Query: 92  LALCGAFAATL-VAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLR 150
           + L G  AA   V +  P+ + V   L+ G  LGA +G  +A  KV +FI TL  M   R
Sbjct: 91  MGLLGGVAAIFDVWLGWPLPLTVAVTLVLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 151 GVTMVYTDGRPI-----------------STGFT-------------------------- 167
           G+ +  T+G  +                 S GFT                          
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLSDSVGFTIGVVGLLGFVAWQWRGRMRRQALGLA 210

Query: 168 DTADTFA---------------WFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVY 212
             A T                 W    Y  G+P PV L+ ++  G  ++   T FGR +Y
Sbjct: 211 SPASTSVVGRQALTAVIVLGAIWLLNDYR-GVPTPVLLLALLLLGGMFMATRTAFGRRIY 269

Query: 213 AVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAA 272
           A+GGN  A RLSGINV+R K+ V+AI GL+ A+AG+I++SRL +  P+AG   ELDAIAA
Sbjct: 270 AIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAA 329

Query: 273 VVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDNKN 332
            V+GGTSL GG G + G ++GA I+  L+N ++++DV +++Q I K  ++LLAV +D+  
Sbjct: 330 CVIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSAT 389

Query: 333 K 333
           K
Sbjct: 390 K 390