Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ribose ABC transporter permease from Escherichia coli ECRC101

 Score =  256 bits (653), Expect = 7e-73
 Identities = 145/321 (45%), Positives = 195/321 (60%), Gaps = 10/321 (3%)

Query: 12  MTNTTSDNRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAII 71
           MT +   + KK+L  + +     L  L+ +V V  F+ PNFFT  NLLNI RQ S+N ++
Sbjct: 1   MTTSAKTSAKKMLMSDLMQTVGILPILILIVAVFGFITPNFFTESNLLNITRQASINIVL 60

Query: 72  AVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIII 131
           A GMT +ILT GIDLSVGS+L      A  +       ++++P AL+ G  LG  +G ++
Sbjct: 61  AAGMTFIILTGGIDLSVGSILGTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALV 120

Query: 132 AKGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLM 191
           A   +  FI TL T T LRG   +  DG    T   ++   F W G  Y LG PVP WL+
Sbjct: 121 AFAGLPPFIVTLGTYTALRGAAYLLADG----TTVINSNINFEWIGNNY-LG-PVP-WLV 173

Query: 192 VVVFAG---AWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGI 248
           V+  A     W++L  T  G ++YAVG N  A RL+GI V  V + VY + GLL+ L GI
Sbjct: 174 VIALAVIVVCWFILRRTTLGVHIYAVGSNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGI 233

Query: 249 IVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLD 308
           +  SRL SA    GMGYELDAIAAV+LGGTS +GG G I GTL+GALII  LNN + L+ 
Sbjct: 234 MSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMG 293

Query: 309 VSSYYQMIAKAVVILLAVLVD 329
           VS ++Q++ K  +I++AVL+D
Sbjct: 294 VSYFWQLVIKGAMIIIAVLID 314