Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  260 bits (664), Expect = 4e-74
 Identities = 143/337 (42%), Positives = 209/337 (62%), Gaps = 16/337 (4%)

Query: 9   TRTMTNTTSDNRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVN 68
           +RT   T ++ R ++    +       I ++ L++     N NF T  N+ NIL + S+ 
Sbjct: 6   SRTKLPTPANGRGRIDPIAFFERFGVFIFMILLLIFFQLQNSNFLTERNITNILTEVSIY 65

Query: 69  AIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAME------------VPVLVAVPTA 116
            I+AVGM+ VILTAGIDLSVGS+LA+C   AA ++  +            +  LV +   
Sbjct: 66  GIMAVGMSFVILTAGIDLSVGSILAVCAMTAAYVIKGDNFTTVDAQAWGGMSWLVGLGIC 125

Query: 117 LLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWF 176
           L  G A+G + G+ + + ++  FI TL  MT+ RG+T+V  DG PI+ GF      + W+
Sbjct: 126 LAMGTAIGFLHGLGVTRLRLSPFIVTLGGMTIWRGLTLVVNDGAPIA-GFDPG---YRWW 181

Query: 177 GTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVY 236
           G G  LG+ +P+W+  +V    W  L+ TR+GR+VYA+GGN  A RL+G+NV RV + VY
Sbjct: 182 GRGELLGVSIPIWIFALVALIGWLALHKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVY 241

Query: 237 AICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALI 296
            + G LA LAG I+++RL SA+  AG+ +EL  IA+VV+GGTSLMGG GRI GT+IG++I
Sbjct: 242 VVIGALAGLAGFILSARLGSAEAVAGISFELRVIASVVIGGTSLMGGYGRISGTIIGSVI 301

Query: 297 IGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDNKNK 333
           +G L N L L++VS+YYQ I   ++I+LAV  D   K
Sbjct: 302 MGILINGLVLMNVSAYYQQIITGLIIVLAVAFDTYAK 338