Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  252 bits (644), Expect = 9e-72
 Identities = 134/315 (42%), Positives = 200/315 (63%), Gaps = 13/315 (4%)

Query: 28  WLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLS 87
           +L++ ++ IALL +V   S + PNF T  NLL + +  ++  ++A+GMTLVILT GIDLS
Sbjct: 10  YLLKARTFIALLLVVAFFSLMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTGGIDLS 69

Query: 88  VGSVLALCGAFAATLVAMEVPV------LVAVPTALLA----GAALGAISGIIIAKGKVQ 137
           VG+V  +CG  A  L+   +P+       + VP  +L     G  +G ++G++I +  V 
Sbjct: 70  VGAVAGICGMVAGALLTNGIPLWGGNTLFLNVPEVILVVSVLGMLIGLVNGVVITRLVVA 129

Query: 138 AFIATLVTMTLLRGVTMVYTDGRPIST--GFTDTADT-FAWFGTGYTLGIPVPVWLMVVV 194
            FI TL  M + RGV +++ DG   +   G     +T FA+ G+G  LGI +P+WLM+  
Sbjct: 130 PFICTLGMMYVARGVALLFNDGGTYANLNGMPALGNTGFAFLGSGTLLGIYLPIWLMLAF 189

Query: 195 FAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRL 254
                YL   T  GRY+YA+GGNESA RL+G+ +  VKI VYA  GL AAL G++V S+L
Sbjct: 190 LLLGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVASQL 249

Query: 255 SSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQ 314
            +A P  G  +E+DAI A VLGGT+L GG+GR+ G++IGA +I FL + + ++ VS ++Q
Sbjct: 250 QTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQ 309

Query: 315 MIAKAVVILLAVLVD 329
           M+ K +VI+ AV++D
Sbjct: 310 MVIKGLVIVTAVVID 324