Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  312 bits (799), Expect = 8e-90
 Identities = 172/311 (55%), Positives = 218/311 (70%), Gaps = 15/311 (4%)

Query: 33  KSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVL 92
           +SLIAL+ L +V+S L+  F T+ N  N++RQ SVN  I+VGMTLVILTAGIDLSVGS+L
Sbjct: 8   QSLIALIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVGSIL 67

Query: 93  ALCGAFAATLVAMEVPV-----------LVAVPTALLAGAALGAISGIIIAKGKVQAFIA 141
           ALCGA  A+L+   + V           L AV   +  G  LG  +G  I + KV  F+A
Sbjct: 68  ALCGAVTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGLGWFNGWTITRFKVPPFVA 127

Query: 142 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 201
           TL  +T+ RG+TM++T G PI+       + FA+ GTG+ LGIP+PVW+  V+ A A  L
Sbjct: 128 TLAMLTIARGLTMLWTGGFPIN----GLGEDFAFLGTGWFLGIPMPVWITAVIVALAVLL 183

Query: 202 LNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTA 261
              T+FGRYVYA+GGNE A RLSGIN+ RVK+ VYAI G LAA+ G+IVTSRL SAQP A
Sbjct: 184 TKKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQPNA 243

Query: 262 GMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVV 321
           G+ YELDAIAAVV+GGTSL GGKG IMG ++G +IIG LNN L LL+VS ++Q + K  V
Sbjct: 244 GISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVKGAV 303

Query: 322 ILLAVLVDNKN 332
           ILLAV++D  N
Sbjct: 304 ILLAVVIDKAN 314