Pairwise Alignments
Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056
Subject, 516 a.a., Galactose/methyl galactoside import ATP-binding protein MglA from Xanthobacter sp. DMC5
Score = 387 bits (994), Expect = e-112
Identities = 208/487 (42%), Positives = 306/487 (62%), Gaps = 4/487 (0%)
Query: 5 ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
IL L I K FPGVKALD S V+PG V L+GENGAGKS+LMKVL G Y DAG +
Sbjct: 24 ILELKGISKTFPGVKALDDVSFAVWPGEVHMLLGENGAGKSSLMKVLCGAYQADAGEYFH 83
Query: 65 QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRIL-WDEMHRKA 123
G+ V + P D++ GI++I QE +L+P L +A+NIFLGRE S +L ++R+A
Sbjct: 84 NGEKVEIRSPADARRFGIAVIFQEFSLVPYLDVAQNIFLGREFPSRIPGLLDRRRLYREA 143
Query: 124 DQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183
++L + ++ +T + +L + +QQMVEI KALS ++++++MDEPT AL+D ETE LF
Sbjct: 144 QKVLDLIGLEVDPRTKVHQLGVAQQQMVEIGKALSQDARILVMDEPTAALSDRETERLFE 203
Query: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKL 243
V+ +L+ +G +VYISHR+ E+F + D ITVLRDGK +G +T+ D L+ MMVGR +
Sbjct: 204 VMRQLQAKGVALVYISHRMAEVFALGDRITVLRDGKLVGRALPGETSPDELVRMMVGRNV 263
Query: 244 EEQYP-RIAAQQGDISLEVIGLTGS-GVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYG 301
+ YP R A + G++ LE GL+ S G+ D+ ++ GEI+G+ GL+G+GRTE+ + I+G
Sbjct: 264 DMSYPRRFATEPGEVVLETKGLSSSNGIRDIDLKVRAGEIVGLCGLVGSGRTEVARAIFG 323
Query: 302 ALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLS 361
A G + + G+ P G+ I E RK +GL L +V +N+++ L +L
Sbjct: 324 ADAVTAGEVRIFGKQ-RTGGPDAAAFAGVGLIPESRKAEGLALIRTVSDNLAVAGLPKLF 382
Query: 362 KGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDE 421
+ + + I+ I TPS Q + LSGGNQQKV I K L ++ I DE
Sbjct: 383 PNMMFSPGKARRSAQELIQRLRIATPSPNQSVAVLSGGNQQKVVIGKWLAAGTRLFIFDE 442
Query: 422 PTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASE 481
PTRG+DVGAK EI+ LI+Q AEG +++++SSE E++ + DR VM RI GE ++
Sbjct: 443 PTRGIDVGAKSEIFALIDQLVAEGAAVLMISSEQAEIVHVCDRAYVMRGKRIVGELGRAD 502
Query: 482 ADQEKLM 488
+E ++
Sbjct: 503 LSEENIV 509
Score = 100 bits (250), Expect = 9e-26
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 19/248 (7%)
Query: 257 ISLEVIGLTGSGVH---DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLN 313
+ L+ I T GV DVSF + GE+ + G GAG++ LMKV+ GA ++ G N
Sbjct: 25 LELKGISKTFPGVKALDDVSFAVWPGEVHMLLGENGAGKSSLMKVLCGAYQADAGEYFHN 84
Query: 314 GRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCAL------DQLSKGVQIR 367
G V SP D GIA I ++ LV L V +N+ L L + R
Sbjct: 85 GEKVEIRSPADARRFGIAVIFQEFS---LVPYLDVAQNIFLGREFPSRIPGLLDRRRLYR 141
Query: 368 HADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVD 427
A +V+ L ++ R ++ L QQ V I K L ++L++DEPT +
Sbjct: 142 EAQKVLD------LIGLEVDPRTKV-HQLGVAQQQMVEIGKALSQDARILVMDEPTAALS 194
Query: 428 VGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKL 487
+ +++++ Q +A+G++++ +S M EV + DRI V+ +G++ G + E ++L
Sbjct: 195 DRETERLFEVMRQLQAKGVALVYISHRMAEVFALGDRITVLRDGKLVGRALPGETSPDEL 254
Query: 488 MACAVGRN 495
+ VGRN
Sbjct: 255 VRMMVGRN 262
Score = 80.1 bits (196), Expect = 2e-19
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 9/226 (3%)
Query: 17 GVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQGQPVSFKGPRD 76
G++ +D L V G ++ L G G+G++ + + + G + AG + G+ + GP
Sbjct: 290 GIRDID---LKVRAGEIVGLCGLVGSGRTEVARAIFGADAVTAGEVRIFGKQRT-GGPDA 345
Query: 77 SQLAGISIIHQELN---LIPQLTIAENIFL-GREMTSPFGRILWDEMHRKADQLLARLNV 132
+ AG+ +I + L T+++N+ + G P + R A +L+ RL +
Sbjct: 346 AAFAGVGLIPESRKAEGLALIRTVSDNLAVAGLPKLFPNMMFSPGKARRSAQELIQRLRI 405
Query: 133 KH-SAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNVINELREQ 191
S + LS G QQ V I K L+ +++ I DEPT + +F +I++L +
Sbjct: 406 ATPSPNQSVAVLSGGNQQKVVIGKWLAAGTRLFIFDEPTRGIDVGAKSEIFALIDQLVAE 465
Query: 192 GCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEM 237
G ++ IS EI +CD V+R + +GE D +E+ ++ M
Sbjct: 466 GAAVLMISSEQAEIVHVCDRAYVMRGKRIVGELGRADLSEENIVRM 511