Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., L-arabinose ABC transporter, ATP-binding protein AraG from Variovorax sp. SCN45

 Score =  415 bits (1067), Expect = e-120
 Identities = 227/502 (45%), Positives = 333/502 (66%), Gaps = 15/502 (2%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDA--GSI 62
           IL +  I K FPGVKAL   +L V  G + A++GENGAGKSTLMKVL+G+Y  D+  G I
Sbjct: 13  ILEMRGITKTFPGVKALSNVNLGVRAGEIHAVVGENGAGKSTLMKVLSGVYPCDSYEGEI 72

Query: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122
            ++G+   F+G  DS+  GI IIHQEL L+P L+IAENIFLG E+T   G I W   + +
Sbjct: 73  RFEGEVRRFRGIADSEKLGIIIIHQELALVPLLSIAENIFLGNEITRG-GVIDWFAAYAR 131

Query: 123 ADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLF 182
             +LLA++ +K    TL+ +L +G+QQ+VEIAKAL+ E K++I+DEPT +L + ++++L 
Sbjct: 132 TRELLAKVGLKEPPTTLVTDLGVGKQQLVEIAKALAKEVKLLILDEPTASLNEKDSDALL 191

Query: 183 NVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIG--ECRVCDTNEDGLIEMMVG 240
            ++ EL+ QG   + ISH+L EI ++ D +TVLRDG  +   +CR    +ED +I  MVG
Sbjct: 192 MLLLELKRQGIASILISHKLNEIAKVADSVTVLRDGATVETMDCRAQPISEDRIIRGMVG 251

Query: 241 RKLEEQYPRIAAQQGDISLEV--------IGLTGSGVHDVSFTLKKGEILGVSGLMGAGR 292
           R +  +YP+ A + G+   EV        +      +  VS  +++GEI+G++GLMGAGR
Sbjct: 252 RDMAHRYPQRAPKIGETVFEVRDWRVHHALHADREQIKGVSLNVRQGEIVGIAGLMGAGR 311

Query: 293 TELMKVIYGALPSER--GVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKE 350
           TEL   ++G    +R  G + ++G+ V+  + +  + +GIAY++EDRKG GLVL   ++ 
Sbjct: 312 TELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAIDHGIAYVTEDRKGLGLVLEEDIRR 371

Query: 351 NMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGL 410
           N+SL  L+ +S+   I    E    +++ +  NI+    EQ++ NLSGGNQQKV ++K L
Sbjct: 372 NISLANLEAVSESAVIDTGREFKVANEYRKALNIRCSGVEQLVVNLSGGNQQKVVLSKWL 431

Query: 411 MTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHE 470
            TKP++LILDEPTRG+DVGAK EIY +I+Q  +EG  I+++SSE+PE+LGM DRI VM+E
Sbjct: 432 FTKPELLILDEPTRGIDVGAKYEIYTIIDQLASEGKGILMISSELPELLGMCDRIYVMNE 491

Query: 471 GRISGEFMASEADQEKLMACAV 492
           GR   EF  +EA QE++M   V
Sbjct: 492 GRFVAEFPVAEASQERIMHAIV 513