Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  410 bits (1055), Expect = e-119
 Identities = 217/494 (43%), Positives = 324/494 (65%), Gaps = 11/494 (2%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L +  I K+FPGVKALD  +LNV P  + ALMGENGAGKSTL+K L GIY KD+GSI +
Sbjct: 13  LLEMRGINKSFPGVKALDNVNLNVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSIVF 72

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
           QG+ V F   +++   GIS++HQELNL+ Q ++ +N++LGR  T     +  D+M++   
Sbjct: 73  QGKEVDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF-VDQDKMYQDTK 131

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
            +   L++    +  +G LS+ + QM+EIAKA S+ +K++IMDEPT +LT+ E   LF +
Sbjct: 132 AIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI 191

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I +L+E+GCGIVYISH+++EIF++CD+IT+LRDG++I    +   + D +I MMVGR L 
Sbjct: 192 IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLEGLDMDKIIAMMVGRSLN 251

Query: 245 EQYPRIAAQQGDISLEVIGLTG---SGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYG 301
           +++P    + GD+ LEV  LT      + DVSF L KGEILG++GL+GA RT++++ ++G
Sbjct: 252 QRFPDKENKPGDVILEVRHLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFG 311

Query: 302 ALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLS 361
                 G I L+G+ +N  +  + + +G A ++E+R+  G+   L +  N  +  +    
Sbjct: 312 IREKSSGTITLHGKKINNHTANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYK 371

Query: 362 KGVQI----RHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVL 417
             V +    R   +   V D +R   +KTP     IG+LSGGNQQKV I + L+T+P++L
Sbjct: 372 NKVGLLDNSRMKSDTQWVIDSMR---VKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEIL 428

Query: 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477
           +LDEPTRG+DVGAK EIYQLI +   +G  II++SSEMPE+LG++DRILVM  G +SG  
Sbjct: 429 MLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIV 488

Query: 478 MASEADQEKLMACA 491
                 Q +++  A
Sbjct: 489 DTKTTTQNEILRLA 502



 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 68/254 (26%), Positives = 125/254 (49%), Gaps = 17/254 (6%)

Query: 250 IAAQQGDISLEVIGLTGS-----GVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALP 304
           I+   G+  LE+ G+  S      + +V+  ++   I  + G  GAG++ L+K ++G   
Sbjct: 5   ISPPSGEYLLEMRGINKSFPGVKALDNVNLNVRPHSIHALMGENGAGKSTLLKCLFGIYQ 64

Query: 305 SERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGV 364
            + G I   G+ V+  S ++ L NGI+ + ++     LVL  SV +NM L      +KG+
Sbjct: 65  KDSGSIVFQGKEVDFHSAKEALENGISMVHQELN---LVLQRSVMDNMWLGRYP--TKGM 119

Query: 365 ---QIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDE 421
              Q +   +  A+ D + + +I   +R   +G LS    Q + IAK      K++I+DE
Sbjct: 120 FVDQDKMYQDTKAIFDELDI-DIDPRAR---VGTLSVSQMQMIEIAKAFSYNAKIVIMDE 175

Query: 422 PTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASE 481
           PT  +       ++ +I + K  G  I+ +S +M E+  + D I ++ +G+         
Sbjct: 176 PTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLEG 235

Query: 482 ADQEKLMACAVGRN 495
            D +K++A  VGR+
Sbjct: 236 LDMDKIIAMMVGRS 249