Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  694 bits (1791), Expect = 0.0
 Identities = 358/492 (72%), Positives = 411/492 (83%), Gaps = 1/492 (0%)

Query: 4   AILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIE 63
           A+L L  I+KAFPGVKAL  A+LNVYPGRVMAL+GENGAGKST+MKVLTGIY++DAGS+ 
Sbjct: 3   ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSLL 62

Query: 64  YQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKA 123
           + G+  +F GP+ SQ AGI IIHQELNLIPQLTIAENIFLGRE  + FG+I W +M+ +A
Sbjct: 63  WLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKKMYAEA 122

Query: 124 DQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183
           D LLA+LN++  +  L+GELS+G+QQMVEIAK LSFESKVIIMDEPTDALTDTET+SLF 
Sbjct: 123 DHLLAKLNLRFKSDKLVGELSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETDSLFR 182

Query: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKL 243
           VI EL+ QG GIVYISHR+KEIFEICDD+TV RDG+FI E  V    ED LIEMMVGRKL
Sbjct: 183 VIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVATLTEDSLIEMMVGRKL 242

Query: 244 EEQYPRIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGAL 303
           E+QYP +    G+I L+V  L G GV+DVSF L+KGEILG+SGLMGAGRTELMKV+YGA+
Sbjct: 243 EDQYPHLDNAPGEIRLKVDNLCGPGVNDVSFVLRKGEILGISGLMGAGRTELMKVLYGAM 302

Query: 304 PSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSK- 362
           P   G + L+G  V   SPQDGLANGI YISEDRK DGLVLG+SVKENMSL ALD  S+ 
Sbjct: 303 PRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALDYFSRA 362

Query: 363 GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEP 422
           G  ++H DE  AV DFIRLFN+KTPS EQ IG LSGGNQQKVAIA+GLMT+PKVLILDEP
Sbjct: 363 GGSLKHKDEQQAVGDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEP 422

Query: 423 TRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEA 482
           TRGVDVGAKKEIYQLINQFKA+G+SIILVSSEMPEVLGMSDRI+VMHEG +SGEF   +A
Sbjct: 423 TRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQA 482

Query: 483 DQEKLMACAVGR 494
            QE LMA AVG+
Sbjct: 483 TQEVLMAAAVGK 494