Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  697 bits (1800), Expect = 0.0
 Identities = 361/493 (73%), Positives = 413/493 (83%), Gaps = 1/493 (0%)

Query: 3   QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62
           +A+L L  I+KAFPGVKAL  A+LNVYPGRVMAL+GENGAGKST+MKVLTGIY++DAG++
Sbjct: 2   EALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTL 61

Query: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122
            + G+  +F GP+ SQ AGI IIHQELNLIPQLTIAENIFLGRE  + FG+I W  M+ +
Sbjct: 62  LWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAE 121

Query: 123 ADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLF 182
           AD+LLA+LN++  +  L+G+LS+G+QQMVEIAK LSFESKVIIMDEPTDALTDTETESLF
Sbjct: 122 ADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLF 181

Query: 183 NVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRK 242
            VI EL+ QG GIVYISHR+KEIFEICDD+TV RDG+FI E  V    ED LIEMMVGRK
Sbjct: 182 RVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRK 241

Query: 243 LEEQYPRIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGA 302
           LE+QYP +    GDI L+V  L G GV+DVSFTL+KGEILGVSGLMGAGRTELMKV+YGA
Sbjct: 242 LEDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGA 301

Query: 303 LPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSK 362
           LP   G + L+G  V   SPQDGLANGI YISEDRK DGLVLG+SVKENMSL AL   S+
Sbjct: 302 LPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSR 361

Query: 363 -GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDE 421
            G  ++HADE  AV DFIRLFN+KTPS EQ IG LSGGNQQKVAIA+GLMT+PKVLILDE
Sbjct: 362 AGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDE 421

Query: 422 PTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASE 481
           PTRGVDVGAKKEIYQLINQFKA+G+SIILVSSEMPEVLGMSDRI+VMHEG +SGEF   +
Sbjct: 422 PTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQ 481

Query: 482 ADQEKLMACAVGR 494
           A QE LMA AVG+
Sbjct: 482 ATQEVLMAAAVGK 494