Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., ABC-type sugar transport system, ATPase component from Enterobacter asburiae PDN3

 Score =  408 bits (1049), Expect = e-118
 Identities = 218/496 (43%), Positives = 318/496 (64%), Gaps = 3/496 (0%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L +  I K F    AL    L V+PG + ALMGENGAGKSTLMK+L G Y+  +G I  
Sbjct: 6   VLEMRSIAKTFGSFHALKGVDLTVFPGEIHALMGENGAGKSTLMKILAGAYTATSGEILI 65

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
             QP   KGP+D+  AGI++I+QE+ L P LT+AENIFLG E+ S  G +   EM  +A 
Sbjct: 66  DDQPFHIKGPKDALAAGITLIYQEMQLAPNLTVAENIFLGSEL-SRGGMVQRKEMVAQAQ 124

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
            ++ RL  + +A  L+ +L++ EQQ VEIA+AL   S++++MDEPT AL+  ET  LF +
Sbjct: 125 AVIERLGAQFNATDLVMKLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHRLFEL 184

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I  LR++G  I+YISHR+ E++E+ D ++VLRDG+++G       N   L+ MMVGR L 
Sbjct: 185 ILRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDKLNASELVRMMVGRPLS 244

Query: 245 EQYPRIA-AQQGDISLEVIGLT-GSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGA 302
           + + +      G   L V  LT G  V   S  ++ GEI+G++GL+GAGR+EL ++I+G 
Sbjct: 245 DLFNKERDIPLGSPRLNVHHLTDGKKVQPCSLQVRSGEIVGLAGLVGAGRSELAQLIFGV 304

Query: 303 LPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSK 362
             +  G+I ++G  V   SP+  + NGI +++E+RK  GL L L+ +EN+++  L++ + 
Sbjct: 305 RKATGGMIEVDGEPVVIHSPRAAIENGIGFLTENRKEQGLFLELAAQENITMATLERDAT 364

Query: 363 GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEP 422
              +         DD I L NI+ P  +   G LSGGNQQK+ I++ +   P++LILDEP
Sbjct: 365 FGMLNRKKAQSISDDAIALLNIRVPHSQVRAGGLSGGNQQKLLISRWVAIGPRILILDEP 424

Query: 423 TRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEA 482
           TRGVDVGAK EIY+++NQ   +G++I+++SSE+PEV+GMSDR+ VM EG I+GE    + 
Sbjct: 425 TRGVDVGAKSEIYRIMNQMARKGVAILMISSELPEVVGMSDRVYVMREGSIAGELHGRDI 484

Query: 483 DQEKLMACAVGRNPAH 498
            QE +M  A G N  H
Sbjct: 485 SQENIMTLATGVNDTH 500