Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Ribose import ATP-binding protein RbsA from Escherichia coli ECRC101

 Score =  399 bits (1026), Expect = e-115
 Identities = 212/497 (42%), Positives = 320/497 (64%), Gaps = 3/497 (0%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L +  I KAF    AL    L VYPG + ALMGENGAGKSTLMKVL G Y+  +G I  
Sbjct: 6   VLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSGEILI 65

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
            G+P   + P+D+  AGI++I+QE+ L P L++AENIFLG E+ S  G +   EM  +A 
Sbjct: 66  DGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSEL-SHGGLVQRKEMLVQAQ 124

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
           +++ RL  + +A   +  L++ EQQ VEIA+AL   S++++MDEPT AL+  ET  LF +
Sbjct: 125 KVIDRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHRLFEL 184

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I  LR++G  I+YISHR+ E++E+ D ++VLRDG+++G     + N   L+ MMVGR L 
Sbjct: 185 IMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMMVGRPLS 244

Query: 245 EQYPRIA-AQQGDISLEVIGLTGSG-VHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGA 302
           + + +      G   L V  LT  G V   S  ++ GEI+G++GL+GAGR+EL ++I+G 
Sbjct: 245 DLFNKERDIPLGKARLNVHHLTDGGKVQPSSLLVRSGEIVGLAGLVGAGRSELAQLIFGV 304

Query: 303 LPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSK 362
             +  G+I ++G  V   SP++ +  GI +++E+RK  GL L ++  EN+++  L++ ++
Sbjct: 305 RKATGGMIEVDGEPVVIHSPREAIDLGIGFLTENRKEQGLFLEMAAAENITMATLERDAR 364

Query: 363 GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEP 422
              +         DD I+L NI+ P  +   G LSGGNQQK+ I++ +   P++L+LDEP
Sbjct: 365 WGMLNRKKAQTISDDAIKLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILLLDEP 424

Query: 423 TRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEA 482
            RGVDVGAK EIY+++N+   +G++I+++SSE+PE++GMSDR+ VM EG I+GE      
Sbjct: 425 ARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIAGELNGKNI 484

Query: 483 DQEKLMACAVGRNPAHA 499
            QE +M  A G N AH+
Sbjct: 485 TQENIMTLATGVNDAHS 501