Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., L-arabinose ABC transporter ATP-binding protein AraG from Dickeya dianthicola ME23

 Score =  393 bits (1009), Expect = e-114
 Identities = 217/495 (43%), Positives = 322/495 (65%), Gaps = 4/495 (0%)

Query: 6   LALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQ 65
           L+   I KAFPGVKALD  S + + G++ ALMGENGAGKSTL+K+L+G Y    G I+ +
Sbjct: 8   LSFRGIGKAFPGVKALDDISFDCHAGQIHALMGENGAGKSTLLKILSGNYLPSQGEIDIK 67

Query: 66  GQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKADQ 125
           GQPV F    D+  AG++II+QEL+L+P++++AENI+LG ++    G +    +  +A  
Sbjct: 68  GQPVRFANTTDALNAGVAIIYQELHLVPEMSVAENIYLG-QLPHKGGLVNRSLLRYEARL 126

Query: 126 LLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNVI 185
            L  L +     T L  LS+G+ QMVEIAKAL+  +K+I  DEPT +L+  E E LF VI
Sbjct: 127 QLEHLGLDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIEQLFRVI 186

Query: 186 NELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGE-CRVCDTNEDGLIEMMVGRKLE 244
            ELR +G  I+Y+SHR++EIF + D ITV +DG+++     +   + + L++ MVGR L 
Sbjct: 187 RELRNEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFADMQQVDHEQLVQAMVGRNLG 246

Query: 245 EQYPRIAAQQGDISLEVIGLTGSGVHD-VSFTLKKGEILGVSGLMGAGRTELMKVIYGAL 303
           + Y       GD  LE+  +   GV   +S +++ GEI+G+ GL+GAGR+ELMK ++GA 
Sbjct: 247 DIYGYQPRPHGDPRLELHEVKAVGVKSPISLSVRSGEIVGLFGLVGAGRSELMKALFGAT 306

Query: 304 PSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQ-LSK 362
              RG + L+G+ +   SP D +  G+    EDRK DG++   SV++N+++ A  + +  
Sbjct: 307 GITRGEVRLDGQLLLARSPGDAIRRGLMLCPEDRKADGIIPVHSVRDNINISARRKHIKS 366

Query: 363 GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEP 422
           G  I  A E    D  I+  NIKTPS  Q+I NLSGGNQQK  + + L  + KV++LDEP
Sbjct: 367 GFIINEAWEEENADRHIQALNIKTPSPAQLIMNLSGGNQQKAILGRWLSEEMKVIMLDEP 426

Query: 423 TRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEA 482
           TRG+DVGAK EIY +I +   +G++++  SS++PEVLG++DRI+VM EG ISGE +  EA
Sbjct: 427 TRGIDVGAKHEIYHVIYELARQGIAVLFASSDLPEVLGLADRIVVMREGAISGELLHDEA 486

Query: 483 DQEKLMACAVGRNPA 497
            ++K+++ A+ +  A
Sbjct: 487 SEQKVLSLAMLKTTA 501