Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., galactose/methyl galactoside ABC transporter ATP-binding protein MglA from Dickeya dadantii 3937

 Score =  418 bits (1074), Expect = e-121
 Identities = 215/494 (43%), Positives = 328/494 (66%), Gaps = 11/494 (2%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L ++ I K+FPGVKALD  +L V P  + ALMGENGAGKSTL+K L GIY KD+GSI++
Sbjct: 13  LLEMTNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSIQF 72

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
           QGQ V FK  +++   G+S++HQELNL+ Q ++ +N++LGR        +  ++M+R   
Sbjct: 73  QGQEVDFKSAKEALENGVSMVHQELNLVLQRSVMDNMWLGRYPKKGLF-VDQEKMYRDTK 131

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
            +   L++    +  +  LS+ + QM+EIAKA S+ +K++IMDEPT +LT+ E   LF +
Sbjct: 132 AIFDELDIDIDPRDKVASLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI 191

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I +L+++GCGIVYISH+++EIF++CD+IT+LRDG+++    +   N D +I MMVGR L 
Sbjct: 192 IRKLKDRGCGIVYISHKMEEIFQLCDEITILRDGQWVATQPLEGLNMDQIIAMMVGRSLN 251

Query: 245 EQYPRIAAQQGDISLEVIGLTG---SGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYG 301
           +++P      GD+ LEV GLT      + DVSF L++GEILG++GL+GA RT++++ ++G
Sbjct: 252 QRFPDKTNTPGDVMLEVRGLTSMRQPSIRDVSFDLRQGEILGIAGLVGAKRTDIVETLFG 311

Query: 302 ALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLS 361
                 G I L+G+ +N  +  + + NG A ++E+R+  G+   L V  N  +  + +  
Sbjct: 312 IREKLSGTIKLHGKDINNHTANEAINNGFALVTEERRSTGIYAYLDVGFNSLISNIHKYK 371

Query: 362 KGVQI----RHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVL 417
             + +    R   +V  V D +R   +KTP     IG+LSGGNQQKV I + L+T+P++L
Sbjct: 372 NSLGLLDNKRMKSDVQWVIDSMR---VKTPGHHTAIGSLSGGNQQKVIIGRWLLTQPEIL 428

Query: 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477
           +LDEPTRG+DVGAK EIYQLI++   +G  II++SSEMPE+LG++DRILVM  G ++G  
Sbjct: 429 MLDEPTRGIDVGAKFEIYQLISELAKKGKGIIIISSEMPELLGVTDRILVMSNGLVAGIV 488

Query: 478 MASEADQEKLMACA 491
                 Q +++  A
Sbjct: 489 ETKNTTQNEILRLA 502



 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 11/247 (4%)

Query: 254 QGDISLEVIGLTGS-----GVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERG 308
           Q +  LE+  ++ S      + +V+  ++   I  + G  GAG++ L+K ++G    + G
Sbjct: 9   QREFLLEMTNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSG 68

Query: 309 VINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRH 368
            I   G+ V+  S ++ L NG++ + ++     LVL  SV +NM L    +  KG+ +  
Sbjct: 69  SIQFQGQEVDFKSAKEALENGVSMVHQELN---LVLQRSVMDNMWLGRYPK--KGLFVDQ 123

Query: 369 ADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDV 428
                         +I    R+++  +LS    Q + IAK      K++I+DEPT  +  
Sbjct: 124 EKMYRDTKAIFDELDIDIDPRDKV-ASLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTE 182

Query: 429 GAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLM 488
                ++ +I + K  G  I+ +S +M E+  + D I ++ +G+          + ++++
Sbjct: 183 KEVNHLFTIIRKLKDRGCGIVYISHKMEEIFQLCDEITILRDGQWVATQPLEGLNMDQII 242

Query: 489 ACAVGRN 495
           A  VGR+
Sbjct: 243 AMMVGRS 249