Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., ABC-type sugar transport system, ATPase component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  434 bits (1115), Expect = e-126
 Identities = 236/497 (47%), Positives = 322/497 (64%), Gaps = 9/497 (1%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L +  I K F GVKALD  SL +  GRV A++GENGAGKSTLMK+L+G+Y    G+I Y
Sbjct: 1   MLTVKNITKEFVGVKALDDVSLELQAGRVTAILGENGAGKSTLMKILSGVYPDYKGTIYY 60

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
            G PV F+  RD+Q  GI+IIHQELNLIP L+I ENIFLGRE  +P G +   +MH++A 
Sbjct: 61  NGDPVKFQNTRDAQEKGINIIHQELNLIPYLSIRENIFLGREPETPMGLLDVAKMHKEAA 120

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
           QLL RL +    +T + +L +G+QQ+VEIAKALS ES+VIIMDEPT A++D E E LF +
Sbjct: 121 QLLHRLKLNVDPETPVSQLKVGQQQLVEIAKALSLESQVIIMDEPTSAISDQEVEILFGI 180

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I  LR +G  I YISH+L E+F I D   VLRDGK I    +    E+ LI+ MVGR++ 
Sbjct: 181 IRALRAEGKAIAYISHKLDELFAIADRYVVLRDGKMIESGEMEGMTEEALIQKMVGREIV 240

Query: 245 EQYPRIAAQQGDISLEVIGLTGSG--------VHDVSFTLKKGEILGVSGLMGAGRTELM 296
            +      Q  +  L V  LT           + D++F L KGE+LG+ GLMGAGRTELM
Sbjct: 241 IERSCSGRQFDETVLSVKHLTVKHPKIADKFLLQDINFELGKGEVLGIFGLMGAGRTELM 300

Query: 297 KVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCA 356
           + ++G LP +   I L G+      PQ+ +  G+A + EDRK DGLVL + +  N SL  
Sbjct: 301 EALFGVLPHQGAEITLAGKVHEFQKPQEAMDAGLALVPEDRKQDGLVLCMDLCTNSSLTV 360

Query: 357 LDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKV 416
           +D +  G  +    E      ++    IK  S  Q++  LSGGNQQKV +AK L T+PKV
Sbjct: 361 VDSILSGGLLDDKKEKGLAQKYMGELKIKASSHRQLVEKLSGGNQQKVVLAKWLATRPKV 420

Query: 417 LILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGE 476
           L+LDEPTRG+D+ AK EIY+LI Q   EG+ +I+VSSE+PE+L +SDR+LVM EGR++  
Sbjct: 421 LMLDEPTRGIDINAKNEIYKLIRQLANEGLGLIVVSSELPEILAVSDRVLVMAEGRLTAN 480

Query: 477 F-MASEADQEKLMACAV 492
             + ++  +++++  A+
Sbjct: 481 IPIDAQTSEDEILQAAI 497



 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 13/242 (5%)

Query: 256 DISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGR 315
           +I+ E +G+    + DVS  L+ G +  + G  GAG++ LMK++ G  P  +G I  NG 
Sbjct: 6   NITKEFVGV--KALDDVSLELQAGRVTAILGENGAGKSTLMKILSGVYPDYKGTIYYNGD 63

Query: 316 TVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKG---VQIRHADEV 372
            V   + +D    GI  I ++     L+  LS++EN+ L    +   G   V   H +  
Sbjct: 64  PVKFQNTRDAQEKGINIIHQELN---LIPYLSIRENIFLGREPETPMGLLDVAKMHKEAA 120

Query: 373 IAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKK 432
             +       + +TP     +  L  G QQ V IAK L  + +V+I+DEPT  +     +
Sbjct: 121 QLLHRLKLNVDPETP-----VSQLKVGQQQLVEIAKALSLESQVIIMDEPTSAISDQEVE 175

Query: 433 EIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAV 492
            ++ +I   +AEG +I  +S ++ E+  ++DR +V+ +G++          +E L+   V
Sbjct: 176 ILFGIIRALRAEGKAIAYISHKLDELFAIADRYVVLRDGKMIESGEMEGMTEEALIQKMV 235

Query: 493 GR 494
           GR
Sbjct: 236 GR 237