Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., hypothetical protein from Escherichia coli BL21

 Score =  442 bits (1137), Expect = e-128
 Identities = 249/497 (50%), Positives = 329/497 (66%), Gaps = 8/497 (1%)

Query: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60
           M++  L +  I K FPGV AL+    ++  G V AL+GENGAGKSTLMK+L+G+Y  D G
Sbjct: 1   MSETFLQMKHITKRFPGVLALNDVQFSLRRGEVHALLGENGAGKSTLMKILSGVYQPDEG 60

Query: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMH 120
            I ++ +PVSF  P  +Q  GI+IIHQE NL P+LT+ ENIF+GRE        L ++  
Sbjct: 61  EIIFEDKPVSFSDPLSAQNVGITIIHQEFNLFPELTVEENIFIGREFCKKNRWRLDEKQQ 120

Query: 121 RKAD-QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETE 179
           R+A  ++L +LN+     TL+ +L++ +QQMVEIAKA+S  ++++IMDEPT ALT+TE E
Sbjct: 121 RQATIEILQKLNLAIKPDTLVADLTVAQQQMVEIAKAISVNARILIMDEPTAALTETEIE 180

Query: 180 SLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMV 239
           SLF V   L+EQG GIVYISHRL+E+  I D  TV+RDG++I            LI MMV
Sbjct: 181 SLFRVTRLLKEQGTGIVYISHRLEELALIADRATVMRDGQYISTVDYECVKISDLIAMMV 240

Query: 240 GRKLEEQYPRIAAQQGDIS-LEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMK 297
           GR L   YPR  A Q  I  LEV GLT  GV +D++FTL +GEILG +GLMGAGRTEL +
Sbjct: 241 GRDLGNIYPRREALQQRIPVLEVNGLTRKGVLNDINFTLYRGEILGFAGLMGAGRTELAR 300

Query: 298 VIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCAL 357
            I+GA   + G + LNG+        D +  GI+Y++EDRK +GL L LSV+ N+ L   
Sbjct: 301 AIFGADSIDSGTLKLNGKETVIKDISDAIQQGISYLTEDRKKEGLALNLSVERNIMLGNY 360

Query: 358 DQLSK---GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKP 414
            + S     V  R   +    ++ ++   IKTP+ EQ   NLSGGNQQK+ IA+ +    
Sbjct: 361 PEYSDRFGNVDSRRCQQTS--EEQVKALRIKTPNLEQAALNLSGGNQQKIIIARWVCKDT 418

Query: 415 KVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRIS 474
            +LI DEPTRG+DVGAK EIY+L+N+  A+G SII++SSE+PEVLGM DRILVM  GRI+
Sbjct: 419 DILIFDEPTRGIDVGAKLEIYELMNRLVAKGKSIIMISSELPEVLGMCDRILVMRSGRIT 478

Query: 475 GEFMASEADQEKLMACA 491
           GE  A EA QEK+M  A
Sbjct: 479 GELSAKEATQEKIMQYA 495