Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  438 bits (1127), Expect = e-127
 Identities = 236/494 (47%), Positives = 332/494 (67%), Gaps = 8/494 (1%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L L  I K FPGVKAL     ++  G V A+ GENGAGKSTLMK+++G+Y    G+I +
Sbjct: 9   LLRLENISKEFPGVKALSNVHFDLRSGEVHAVCGENGAGKSTLMKIISGVYQPSEGTILH 68

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
           +G+ V +  P  S+ AGI+IIHQELNL+P L++AENI+L RE    F  +   ++   A 
Sbjct: 69  KGEKVQYASPLQSEAAGIAIIHQELNLVPHLSVAENIYLAREPRRGF-LVDRKKLRLDAK 127

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
           + L RL V  +   L+  LS+ + QMVEIAKALS +++V+IMDEPT +LT+ ET  LF V
Sbjct: 128 RCLDRLGVDINPDQLVRSLSVAQCQMVEIAKALSLDAEVLIMDEPTSSLTEQETRLLFKV 187

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I +L+  G GIVYISHRL E+ EI D +T+LRDG++I          D ++  MVGR LE
Sbjct: 188 IRDLKASGVGIVYISHRLDEMAEIVDRVTILRDGRYISTDDFASITVDDIVTRMVGRSLE 247

Query: 245 EQYP-RIAAQQGDISLEVIGLTGSGVH-DVSFTLKKGEILGVSGLMGAGRTELMKVIYGA 302
           +++P R +    DI   V GLT +GV  DVSF+L++GEILG +GLMGAGRTE+ + I+GA
Sbjct: 248 DKFPERTSRPTDDILFSVEGLTRNGVFSDVSFSLRRGEILGFAGLMGAGRTEVARAIFGA 307

Query: 303 LPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSK 362
            P + G I  NGR ++  SPQD +  GIAY+SEDRK DGL + +SV  N +L  L ++S 
Sbjct: 308 DPLDAGKIVFNGRELSIGSPQDAIEEGIAYLSEDRKSDGLAIKMSVAANTTLANLGEVSN 367

Query: 363 G---VQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLIL 419
               +  +  D+V     ++ L NI+TPS +Q +  LSGGNQQK+ I K L  + +VL  
Sbjct: 368 RFGLIDFKKHDDV--AKRYVDLLNIRTPSIDQTVRLLSGGNQQKIIIGKWLFRQSRVLFF 425

Query: 420 DEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMA 479
           DEPTRG+DVGAK  IY+++++  A+G+ +IL+SSE+PE+LG++DRI V H+GRI+G    
Sbjct: 426 DEPTRGIDVGAKFAIYKIMDELAAQGIGVILISSELPEILGLTDRIAVFHQGRITGVLET 485

Query: 480 SEADQEKLMACAVG 493
           ++ +QE++M  A G
Sbjct: 486 AKTNQEEIMRYASG 499