Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 906 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  251 bits (642), Expect = 1e-70
 Identities = 205/693 (29%), Positives = 321/693 (46%), Gaps = 79/693 (11%)

Query: 16  ESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQV 75
           E+L  R   G+E+LS           + + V+L S  + +  +  + + A + +  +   
Sbjct: 3   EALQFRKLVGREALSRL---------YAFDVELLSNSNGIDPKALLGRPATVAMQTESGG 53

Query: 76  VQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMG 135
            + ++GI      G+   R +FY +TL P L   +LRS+ RIFQ +SVP+I++ +L   G
Sbjct: 54  TRYLSGIASFFGLGEEDARQSFYRMTLRPWLWLATLRSDFRIFQNKSVPDILTEVLGGYG 113

Query: 136 IEDYAFA--LKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTD--S 191
              YA    L RE    ++CVQY E+D  ++ R+   EG+ Y   HE  +H L+F D  +
Sbjct: 114 ---YAMEQRLSREYRAWDYCVQYHESDFSYVSRLCELEGIGYYFRHEEHRHVLVFADDIA 170

Query: 192 SDSQPKLA------KPVPYNALAGGEINLPYVVDLQFKTTAQV--SHTELKDYSFKKPAY 243
           +  +P          P   + +  G    P     ++K+  ++        DY F KP+ 
Sbjct: 171 ASHEPLPGGGTVRFHPSETSGMTSGSRASPGERIYEWKSGEEMRSGFHFTDDYDFLKPSA 230

Query: 244 GFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLL 303
             + + Q     +    +E ++ PG YK   +G+ +++IR E    +  LA  +S++  L
Sbjct: 231 DLSGQRQAP-AGHTHDYFERYEWPGGYKQHEDGEVYTRIRTEEQHSERCLASGRSNKREL 289

Query: 304 LAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWR 363
             G  F+L +H     NR +L+    ++  +     E  G G+       +  PA   WR
Sbjct: 290 APGHVFELANHPRQDQNRKYLLTSVEYELQENMQASEGAGEGSVQRF-AFEAQPADHAWR 348

Query: 364 ARPCA-KPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEW 422
            R    KP+  GP  A VVGP+ EE + D  GRVKV F WDR  + NE SSCWVRV+  W
Sbjct: 349 PRRVTLKPRTRGPQTAIVVGPKNEETWTDRHGRVKVEFHWDRLGARNENSSCWVRVSMGW 408

Query: 423 AGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRT--- 479
           AG  +G+ A+PRVGHEV+V FLNGDPD PIITGR ++A N   + LP+    + +R+   
Sbjct: 409 AGDTFGTAALPRVGHEVVVDFLNGDPDCPIITGRVFNAANMPAWRLPEQANLSGMRSREL 468

Query: 480 ETHQGQGY------NELSFEDQAGSEQILLHAQKDWDAL-IEH----DHTE--------- 519
             + G G+      N L  +D  G  Q  L +     +L + H    D TE         
Sbjct: 469 NANDGPGHAGGSRGNHLVLDDHPGKIQAQLKSDHLCSSLSLGHIGRIDGTEGRTDDRGEG 528

Query: 520 -VIRHDQHLTVDNDR------FTRIQRNQHLTVEGEVRSKI-ALDSSHE-----VGASLQ 566
             +R D H +V   +        R     H+T  GE  +++ A    HE        ++ 
Sbjct: 529 AELRTDGHASVRAAKGLLLTTEARPGAQAHITDIGETVARLTAARDLHERQSQTAQEAMA 588

Query: 567 HKVGQRIAVEA---GKEISLKSGAKIVVEAGA-------ELTLKAGGSFVKVDAGGVHLV 616
           H+ G + AV A    +  ++K GA    E GA        L L +        AG  H+ 
Sbjct: 589 HEAGDQDAVTAALKAQNDAIKGGA---AEHGAFAELGEPHLVLASAAGIQSTAAGATHIA 645

Query: 617 GPAIN-LNAGG--SAGSGSAYGGQLAAAPRMLA 646
               N L++GG  S  +G ++   +  A R+ A
Sbjct: 646 SITHNALSSGGHTSISAGRSFLVSVRDAARLFA 678