Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 988 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  234 bits (597), Expect = 2e-65
 Identities = 147/470 (31%), Positives = 230/470 (48%), Gaps = 8/470 (1%)

Query: 42  FRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLT 101
           + + +DL  + + + A+  + + A +++  +G V + + GI  +        RH+FY L 
Sbjct: 30  YAFDIDLLGSSNGIDAKALLGKAATVSVETEGGV-RYLGGIATRFGLQQEDARHSFYRLR 88

Query: 102 LVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDL 161
           + P L   +LRS+ RIFQ +SVP+I++ +L   G        + +  + ++CVQY E+D 
Sbjct: 89  MRPWLWLATLRSDFRIFQAKSVPDILTEVLGPYGYPVEQKLSRADYRRWDYCVQYHESDF 148

Query: 162 QFLHRIAAEEGLVYSHLHEAQKHTLLFTDS---SDSQPKLAKPVPYNALA-GGEINLPYV 217
            F+ R+   EG+ Y   HE  +H L+F D    S S     + V Y+ L   G      +
Sbjct: 149 DFVSRLCELEGIYYYFRHEQSQHVLVFADDMAGSHSPLPGGEEVRYHPLEKSGMGQRERI 208

Query: 218 VDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGK 277
              +     +  H    DY F+KP    +   Q     +   +YE+++ PG +    +G+
Sbjct: 209 YAWEIAEEVRPGHHYNDDYDFEKPKAELSHLRQMPP-GHDHDSYENYEWPGGFVQHGDGE 267

Query: 278 AFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDHAMNRDWLVVQAN-HQGTQPQ 336
            +++IR E           +++   L  G    L  H     NR +L+V  + H     Q
Sbjct: 268 TYARIRNEEQLSQRNRVTGRANLRELATGHTLRLTGHPKADQNRQYLLVSVSYHLQENLQ 327

Query: 337 ALQEEGGSGATTYSNQLKLIPAHITWR-ARPCAKPQVDGPMIATVVGPQGEEIYCDNFGR 395
           A +   G+  +         P    WR AR   KP+  GP  A VVGP GE+I+ D +GR
Sbjct: 328 ASEGAEGTEGSVQRFAFDAQPTSYPWRPARTTPKPRTRGPQTAMVVGPAGEQIWTDQYGR 387

Query: 396 VKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITG 455
           +KV F WDR    NE SSCWVRV+  WAG+ +G  ++PR+G EVIV FLNGDPD PI+TG
Sbjct: 388 IKVQFHWDRIGKENENSSCWVRVSTAWAGATFGMTSVPRIGMEVIVDFLNGDPDYPIVTG 447

Query: 456 RTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHA 505
             ++A     + LP  K  + +R+    G   N L  +D  G  Q  L +
Sbjct: 448 CVHNADTMPAWELPGQKHLSGIRSRELGGGRGNHLVLDDTQGKIQAQLRS 497