Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., type VI secretion system tip protein VgrG from Escherichia coli ECRC62

 Score =  400 bits (1029), Expect = e-115
 Identities = 239/641 (37%), Positives = 350/641 (54%), Gaps = 33/641 (5%)

Query: 4   LQFQLKVDGLEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASA-LSNLTAEQFVD 62
           L+F L+VDGL  ++  V  F   +SLS           F   + L S    +L   Q +D
Sbjct: 5   LRFTLEVDGLPPDAFAVVSFHLNQSLSSL---------FSLDLSLVSQQFLSLEFAQVLD 55

Query: 63  QTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQS 122
           + A+LTI +   V +++ G+V     G+       YS+ + P L R  LR N RIFQ + 
Sbjct: 56  KMAYLTIWQGDDVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNED 115

Query: 123 VPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVY--SHLHE 180
           +  I+  +LQE G+ +++         REFCVQY ETD  FL R+AAEEG+ +   H ++
Sbjct: 116 IKSILGTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEHAYK 175

Query: 181 AQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKK 240
           +   +L+  D+    P+  + +P+N     E++   +   ++    + S    KDY+FK+
Sbjct: 176 STDQSLVLCDTVRHLPESFE-IPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKR 234

Query: 241 PAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDE 300
           P +      +G+   YQ+  YE +D PGR+K  A+G+ F++ +++  R +A  A   S  
Sbjct: 235 PGWAGRFEQEGQHQDYQRTQYEVYDYPGRFKS-AHGQNFARWQMDGWRNNAETARGMSRS 293

Query: 301 PLLLAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHI 360
           P +  G R  L  H    +NR+W VV +   G QPQA+    G+G T   N   +IPA  
Sbjct: 294 PEIWPGRRIVLTGHPQANLNREWQVVASELHGEQPQAVPGRQGAG-TALENHFAVIPADR 352

Query: 361 TWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQ 420
           TWR +P  KP VDGP  A V GP GEEI+CD  GRV+V F WDRY+ +++ SSCW+RVAQ
Sbjct: 353 TWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPADQDSSCWIRVAQ 412

Query: 421 EWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTE 480
            WAG+ +G +AIPRVG EVIV FLNGDPDQPII GRTYH  N  P +LP  KT+  +R++
Sbjct: 413 AWAGTGFGHLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSK 472

Query: 481 THQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQR- 539
           T+ G G+NEL F+D  G EQ+ +HAQK+ D  + +D T  ++HD   TV ND+   IQ  
Sbjct: 473 TYMGSGFNELKFDDATGREQVYIHAQKNMDTEVLNDRTTTVKHDHRETVKNDQTVTIQEG 532

Query: 540 NQHLTVE------GEVRSKIALD---------SSHEVGASLQHKVGQRI-AVEAGKEISL 583
           N+ LTVE      G ++  ++ D          S  V A      G  I A  A KEI L
Sbjct: 533 NRLLTVEKGHKITGVLKGSLSEDVFQDRGTIAGSVHVDAVNNGGEGDGIQAYTAIKEILL 592

Query: 584 KSGAKIVVEAGAELTLKAGGS-FVKVDAGGVHLVGPAINLN 623
                 +      + L+ G S  +++   G+ +VG ++ +N
Sbjct: 593 AVEESKIALTPDGIQLQVGESTVIRLSKDGITIVGGSVFIN 633