Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., type VI secretion system tip protein VgrG from Dickeya dianthicola ME23

 Score =  525 bits (1351), Expect = e-153
 Identities = 271/621 (43%), Positives = 386/621 (62%), Gaps = 18/621 (2%)

Query: 4   LQFQLKVDGLEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQ 63
           LQF +KV  L + +  V  FE  E+L+           F   ++LAS+ +++     +DQ
Sbjct: 7   LQFTVKVGALPETTFAVVDFELSEALNQP---------FALSLNLASSQADIDFGAVLDQ 57

Query: 64  TAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSV 123
              L +  +G++ ++++GIV + ++GDTG R T Y   + PAL RL LR+N+R+FQ +  
Sbjct: 58  PCELRVWYEGELQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARLFQTRKP 117

Query: 124 PEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQK 183
             IIS LL+E GI D+AFAL+ + A RE+CVQYRE+DL F+HR+AAEEGL Y H  EA K
Sbjct: 118 DAIISTLLEEAGITDFAFALRHDHAAREYCVQYRESDLAFIHRLAAEEGLFYFHEFEAGK 177

Query: 184 HTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAY 243
           H ++F D + +  K    + +N    G     YV   ++      +   LKDYSFK PAY
Sbjct: 178 HRVVFADDAGALSK-GPELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAY 236

Query: 244 GFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLL 303
           G        ++ +Q+ +Y+HFD PGR+K D +GKAF+  RL+ LR  A+    +S+   L
Sbjct: 237 GLLHNRMSSELDHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGAGESNAAAL 296

Query: 304 LAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWR 363
           + G  F L +H + A N  W VV   H G QPQAL+EE G   TT SN+ +++ A  TWR
Sbjct: 297 MPGSSFTLTEHPNAAFNLAWQVVAVTHSGQQPQALEEESGGEPTTLSNRFEVVKATTTWR 356

Query: 364 ARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWA 423
           A    KP+VDGP IATVVGP GEEIYCD +GR+K+ FPWDRY +S+++SSCWVRV+Q WA
Sbjct: 357 AAMPYKPRVDGPQIATVVGPAGEEIYCDQYGRIKLQFPWDRYGASDDQSSCWVRVSQGWA 416

Query: 424 GSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQ 483
           G QYG +AIPR+GHEV+VSFL GDPDQPI+TGRT+HATN +PY LP +KT+T LRT TH+
Sbjct: 417 GGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTRTHK 476

Query: 484 GQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHL 543
           G G+NEL FEDQAG E++ +HAQKD + ++ ++ +  +       V  D+   +Q NQ +
Sbjct: 477 GAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHSENVGGDQTVVVQHNQTV 536

Query: 544 TVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLKAGG 603
           ++E    + I    +  VG       G++ +V     +++ SG   VV  G  + L   G
Sbjct: 537 SIEQNQHTGIKGTQNINVGN------GRQTSVTTTDTLTV-SGDVTVVSTGGNIRLSTAG 589

Query: 604 SFVKVD-AGGVHLVGPAINLN 623
            ++ +D AG + +VG  + LN
Sbjct: 590 GYISIDHAGDISIVGNHLMLN 610