Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., type VI secretion system tip protein VgrG from Dickeya dianthicola ME23

 Score =  528 bits (1360), Expect = e-154
 Identities = 275/628 (43%), Positives = 390/628 (62%), Gaps = 25/628 (3%)

Query: 4   LQFQLKVDGLEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQ 63
           LQF +K+  L D +  V  FE  E+L+           F   + LAS+ +++     +DQ
Sbjct: 7   LQFTVKIGALPDTTFAVVDFELSEALNQP---------FALSLSLASSQADIDFGAVLDQ 57

Query: 64  TAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSV 123
              L +  +G++ ++++GIV + ++GDTG R T Y   + PAL RL LR+N+RIFQ Q  
Sbjct: 58  PCELAVWYEGELQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTQKP 117

Query: 124 PEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQK 183
             II  LL+E GI D+AFAL+ + A RE+CVQYRE+DL F+HR+AAEEGL Y H  EA K
Sbjct: 118 DAIIGTLLEEAGISDFAFALRHDHAVREYCVQYRESDLAFIHRLAAEEGLFYFHEFEAGK 177

Query: 184 HTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAY 243
           H ++F D + + PK    + +N    G     YV   ++      +   LKDYSFK PAY
Sbjct: 178 HRVVFADDAGALPK-GPELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAY 236

Query: 244 GFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLL 303
           G   +    ++A+Q+ +Y+HFD PGR+K D +GKAF+  RL+ LR  A+    +S+   L
Sbjct: 237 GLLHKKTSNELAHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGAGESNAAAL 296

Query: 304 LAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWR 363
           + G  F L +H + A N  W VV   H G QPQAL+EE G   TT SN  +++ A  TWR
Sbjct: 297 MPGSSFTLTEHPNPAFNLAWQVVAVTHSGQQPQALEEESGGEPTTISNSFEVVKATTTWR 356

Query: 364 ARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWA 423
           A    KP+VDGP IA VVGP GEEIYCD FGRVK+ FPWDRY +S+++SSCWVRV+Q WA
Sbjct: 357 AAMPYKPRVDGPQIAMVVGPAGEEIYCDKFGRVKLQFPWDRYGASDDQSSCWVRVSQGWA 416

Query: 424 GSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQ 483
           G QYG +AIPR+GHEV+VSFL GDPDQPI+TGRT+HATN +PY LP +KT+T LRT TH+
Sbjct: 417 GGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHK 476

Query: 484 GQGYNELSFEDQAGSEQILLHAQKDWDALIEHD--------HTEVIRHDQHLTVDNDRFT 535
           G G+NEL FEDQAG E++ +HAQKD + ++ ++        HTE +  DQ + V +++  
Sbjct: 477 GAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHTENVGGDQTVVVQHNQTV 536

Query: 536 RIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGA 595
            ++ NQ   ++GE    +  +    V  +   +V   IA+++      +SG  ++  AG 
Sbjct: 537 SVKENQVTEIQGEQTVAVTQNRHTTVNDNESLQVKNNIAIQS------QSGDILIATAGG 590

Query: 596 ELTLKAGGSFVKVDAGGVHLVGPAINLN 623
            + + + G+ + +   G+ L G  I+LN
Sbjct: 591 FIAIDSEGN-ISITGKGLVLNGTRIDLN 617