Pairwise Alignments

Query, 421 a.a., type VI secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., type VI secretion system protein TssA from Variovorax sp. OAS795

 Score = 47.8 bits (112), Expect = 8e-10
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)

Query: 21  EIRGLEPYAKVREEINRRFNPIAGG-TDWAVVKEYCEQLACNQGMDFLICGYYAVACLKT 79
           ++R    +  ++ EI +  +P A G TDW  V +    L  ++G D L+ GY + A L+ 
Sbjct: 23  DVRDDPRFEALQLEIGKLSSPGADGQTDWQRVSQLASVLLADKGKDLLVAGYLSAALLQA 82

Query: 80  QGLAGYATGMELMSASLANQGE---CDVKSAKVRKEILDWVNARVV-----QELKALKPT 131
            GL G A G+E++   L    +     +   + R+  L W+  R       Q+   L+P 
Sbjct: 83  DGLPGLAAGLEIVGDLLEQFWDGMFPPLARLRARRNALQWLLDRAALSAEEQQWSELEPQ 142

Query: 132 YESLRD 137
             +L D
Sbjct: 143 PAALVD 148