Pairwise Alignments

Query, 421 a.a., type VI secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Type VI secretion system protein TssA from Escherichia coli ECOR27

 Score = 68.2 bits (165), Expect = 5e-16
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 6/135 (4%)

Query: 23  RGLEPYAKVREEINRRFNPIAGGTDWAVVKEYCEQLACNQGMDFLICGYYAVACLKTQGL 82
           RGL  ++ +REEIN+  +P     +W +V+     +    G+D     YY +A  +TQGL
Sbjct: 17  RGLPEFSAIREEINKASHPSQPELNWKLVESLALAIFKANGVDLHTATYYTLARTRTQGL 76

Query: 83  AGYATGMELMSASLANQ-GECDVKSAKVRKEILDWVNARVVQELKALKPTYES-LRDLYR 140
           AG+  G EL++A +++   +   +    R E+LDW N+R    L+      ES L  +YR
Sbjct: 77  AGFCEGAELLAAMVSHDWDKFWPQGGPARTEMLDWFNSRTGNILRQQISFAESDLPLIYR 136

Query: 141 AERH----CERLHQL 151
            ER     C++L Q+
Sbjct: 137 TERALQLICDKLQQV 151